C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048180 Plekha1-003 ENSMUSG00000040268 10090 + 7:130865910-130913302 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonLiverMuscleOvaryPlacentaTestisENSMUST00000048180
Transcript ID Bladder Brain Breast Colon Liver Muscle Ovary Placenta Testis
ENSMUST00000048180 8.700±2.12 13.627±8.48 3.201±0.00 7.384±5.63 2.759±3.47 2.695±0.00 6.892±0.00 6.630±3.64 0.542±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350
CIL_0001BE CIL_0001BE_0002 CGP 7:130162451-133123350
CIL_0001BB CIL_0001BB_0002 CGP 7:130774069-130913312
CIL_0005TA CIL_0005TA_0002 CGP 7:130865756-130985660

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001553 IGI luteinization
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0007283 IMP spermatogenesis
GO:0008209 IMP androgen metabolic process
GO:0008210 IGI estrogen metabolic process
GO:0008585 IGI female gonad development
GO:0009791 IMP post-embryonic development
GO:0014065 IEA phosphatidylinositol 3-kinase signaling
GO:0030165 IEA PDZ domain binding
GO:0031529 IEA ruffle organization
GO:0032587 IEA ruffle membrane
GO:0033327 IMP Leydig cell differentiation
GO:0035264 IMP multicellular organism growth
GO:0043325 IEA phosphatidylinositol-3,4-bisphosphate binding
GO:0045184 IEA establishment of protein localization
GO:0048008 IMP platelet-derived growth factor receptor signaling pathway
GO:0048705 IMP skeletal system morphogenesis
GO:0050853 IEA B cell receptor signaling pathway
GO:0051898 IEA negative regulation of protein kinase B signaling
GO:0060021 IMP palate development
GO:0060325 IMP face morphogenesis
GO:0070062 IEA extracellular vesicular exosome
GO:0070301 IEA cellular response to hydrogen peroxide

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368988 PLEKHA1-201 protein_coding Homo_sapiens 0 688
ENST00000368989 PLEKHA1-001 protein_coding Homo_sapiens 0 688
ENST00000368990 PLEKHA1-002 protein_coding Homo_sapiens 0 1168
ENST00000392799 PLEKHA1-004 protein_coding Homo_sapiens 0 1168
ENST00000433307 PLEKHA1-202 protein_coding Homo_sapiens 0 1168
ENST00000481451 PLEKHA1-006 retained_intron Homo_sapiens 0 427
ENST00000494222 PLEKHA1-007 processed_transcript Homo_sapiens 0 678

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