C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000151119 Plekha1-004 ENSMUSG00000040268 10090 + 7:130865903-130909821 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryTestisENSMUST00000151119
Transcript ID Brain Ovary Testis
ENSMUST00000151119 21.893±0.00 5.101±0.00 0.822±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350
CIL_0001BE CIL_0001BE_0002 CGP 7:130162451-133123350
CIL_0001BB CIL_0001BB_0002 CGP 7:130774069-130913312
CIL_0005TA CIL_0005TA_0002 CGP 7:130865756-130985660

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001553 IGI luteinization
GO:0007283 IMP spermatogenesis
GO:0008209 IMP androgen metabolic process
GO:0008210 IGI estrogen metabolic process
GO:0008585 IGI female gonad development
GO:0009791 IMP post-embryonic development
GO:0033327 IMP Leydig cell differentiation
GO:0035264 IMP multicellular organism growth
GO:0048008 IMP platelet-derived growth factor receptor signaling pathway
GO:0048705 IMP skeletal system morphogenesis
GO:0060021 IMP palate development
GO:0060325 IMP face morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368988 PLEKHA1-201 protein_coding Homo_sapiens 0 826
ENST00000368989 PLEKHA1-001 protein_coding Homo_sapiens 0 826
ENST00000368990 PLEKHA1-002 protein_coding Homo_sapiens 0 828
ENST00000392799 PLEKHA1-004 protein_coding Homo_sapiens 0 828
ENST00000433307 PLEKHA1-202 protein_coding Homo_sapiens 0 828
ENST00000463663 PLEKHA1-009 protein_coding Homo_sapiens 0 193
ENST00000481451 PLEKHA1-006 retained_intron Homo_sapiens 0 424

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