C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001BQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000011886-ENSDARG00000004539 CGP 7955 2:20678954-20719864
GeneTranscriptPositionBiotype
ENSDARG00000004539 (ptgs2a)
prostaglandin-endoperoxide synthase 2a 		ENSDART00000006870 (ptgs2a-001) 20712497-20719864 protein_coding
ENSDART00000150051 (ptgs2a-002) 20715171-20716335 retained_intron
ENSDARG00000011886 (pdca)
phosducin a 		ENSDART00000007654 (pdca-201) 20678962-20683739 protein_coding
ENSDART00000149989 (pdca-001) 20678954-20686429 protein_coding
CIL_0001BQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000017634-ENSDARG00000010276 CGP 7955 20:34108939-34152023
GeneTranscriptPositionBiotype
ENSDARG00000010276 (ptgs2b)
prostaglandin-endoperoxide synthase 2b 		ENSDART00000010028 (ptgs2b-001) 34146426-34152023 protein_coding
ENSDARG00000017634 (pdcb)
phosducin b 		ENSDART00000008140 (pdcb-002) 34108939-34115348 protein_coding
ENSDART00000062539 (pdcb-001) 34108939-34115348 protein_coding
CIL_0001BQ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000116703-ENSG00000073756 CGP 9606 1:186443566-186680427
GeneTranscriptPositionBiotype
ENSG00000073756 (PTGS2)
prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 		ENST00000367468 (PTGS2-001) 186671791-186680427 protein_coding
ENST00000466691 (PTGS2-003) 186674496-186675869 processed_transcript
ENST00000490885 (PTGS2-002) 186672893-186680423 processed_transcript
ENST00000559627 (PTGS2-004) 186674353-186680290 nonsense_mediated_decay
ENST00000559800 (PTGS2-005) 186678270-186680423 processed_transcript
ENSG00000116703 (PDC)
phosducin 		ENST00000391997 (PDC-001) 186443566-186461122 protein_coding
ENST00000497198 (PDC-002) 186443582-186448724 protein_coding
ENSG00000228238 (GS1-304P7.2)
 ENST00000456921 (GS1-304P7.2-001) 186578279-186579299 processed_pseudogene
ENSG00000229739 (RP11-295K2.3)
 ENST00000429768 (RP11-295K2.3-001) 186451081-186451749 antisense
ENST00000622121 (RP11-295K2.3-002) 186435161-186470291 antisense
ENSG00000233196 (GS1-304P7.1)
 ENST00000450032 (GS1-304P7.1-001) 186580515-186581191 processed_pseudogene
ENSG00000273198 (GS1-304P7.3)
 ENST00000609032 (GS1-304P7.3-001) 186521773-186522304 lincRNA
ENSG00000275000 (AL096803.1)
 ENST00000619309 (AL096803.1-201) 186586187-186586269 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001BQ_0001ENSDARG00000004539ENSDART00000006870ENSDART00000150051ENSDARG00000011886ENSDART00000007654ENSDART00000149989CIL_0001BQ_0002ENSDARG00000010276ENSDART00000010028ENSDARG00000017634ENSDART00000008140ENSDART00000062539CIL_0001BQ_0003ENSG00000073756ENST00000367468ENST00000466691ENST00000490885ENST00000559627ENST00000559800ENSG00000116703ENST00000391997ENST00000497198ENSG00000228238ENST00000456921ENSG00000229739ENST00000429768ENST00000622121ENSG00000233196ENST00000450032ENSG00000273198ENST00000609032ENSG00000275000ENST00000619309
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001BQ_0001ENSDARG00000004539ENSDART00000006870ENSDARG00000011886ENSDART00000007654ENSDART00000149989CIL_0001BQ_0002ENSDARG00000010276ENSDART00000010028ENSDARG00000017634ENSDART00000008140ENSDART00000062539CIL_0001BQ_0003ENSG00000073756ENST00000367468ENST00000490885ENST00000559627ENSG00000116703ENST00000391997ENST00000497198ENSG00000228238ENST00000456921ENSG00000229739ENST00000429768ENST00000622121ENSG00000233196ENST00000450032ENSG00000273198ENST00000609032ENSG00000275000ENST00000619309
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004539 ENSDART00000006870 N/A N/A N/A 0.662±0.55 N/A N/A 2.253±0.82 1.356±0.00 N/A N/A 1.344±0.00 N/A N/A N/A
ENSDART00000150051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000011886 ENSDART00000007654 N/A N/A N/A 0.469±0.21 N/A N/A 0.083±0.05 0.122±0.01 0.022±0.00 N/A N/A N/A N/A N/A
ENSDART00000149989 N/A N/A N/A 0.218±0.00 N/A N/A 0.087±0.05 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000010276 ENSDART00000010028 N/A N/A N/A 0.332±0.23 N/A N/A 1.993±0.05 0.795±0.71 0.020±0.00 N/A 1.021±0.00 N/A N/A N/A
ENSDARG00000017634 ENSDART00000008140 N/A N/A N/A 0.286±0.00 N/A N/A 0.186±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000062539 N/A N/A N/A 0.335±0.18 N/A N/A 0.165±0.08 0.068±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000073756 ENST00000367468 0.157±0.00 N/A N/A 0.760±0.28 0.524±0.00 3.571±0.00 0.103±0.02 0.151±0.05 1.116±1.04 27.460±0.00 0.118±0.00 0.737±0.84 2.270±1.55 0.314±0.24
ENST00000466691 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490885 N/A N/A 0.328±0.00 N/A N/A N/A 0.043±0.00 N/A N/A 1.952±0.00 0.047±0.00 N/A N/A N/A
ENST00000559627 0.432±0.00 N/A 2.428±0.00 1.613±0.69 3.834±0.00 2.180±0.00 0.091±0.00 0.045±0.00 4.789±4.73 10.136±0.00 N/A 1.045±0.78 0.589±0.34 N/A
ENST00000559800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000116703 ENST00000391997 N/A N/A N/A 0.157±0.00 N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A 0.099±0.00
ENST00000497198 N/A 0.165±0.00 N/A N/A 0.104±0.01 N/A 0.031±0.01 0.166±0.00 0.088±0.00 N/A 0.251±0.00 0.018±0.00 0.029±0.00 0.085±0.00
ENSG00000228238 ENST00000456921 N/A N/A N/A 0.028±0.00 0.036±0.00 0.047±0.00 0.036±0.02 0.124±0.00 0.083±0.00 N/A 0.077±0.00 N/A N/A 0.026±0.00
ENSG00000229739 ENST00000429768 N/A 0.192±0.00 N/A N/A N/A N/A 0.098±0.00 N/A 0.095±0.00 N/A N/A N/A N/A N/A
ENST00000622121 N/A N/A 0.949±0.00 N/A 0.081±0.04 1.079±0.00 0.094±0.00 2.177±0.00 N/A 0.525±0.00 N/A 0.251±0.19 N/A 0.057±0.00
ENSG00000233196 ENST00000450032 N/A N/A 0.610±0.00 N/A N/A 0.014±0.00 N/A 0.219±0.00 N/A N/A N/A N/A N/A 0.220±0.00
ENSG00000273198 ENST00000609032 N/A 0.190±0.00 N/A 0.360±0.00 0.053±0.00 N/A N/A 0.037±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000275000 ENST00000619309 N/A N/A N/A N/A 0.427±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading