C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collagen, type X, alpha 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000243222 COL10A1-201 ENSG00000123500 9606 - 6:116118923-116126133 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastKidneyLiverLungOvaryTestisENST00000243222
Transcript ID Adipose Brain Breast Kidney Liver Lung Ovary Testis
ENST00000243222 0.019±0.00 0.215±0.00 0.013±0.00 0.246±0.00 0.027±0.00 0.308±0.00 0.673±0.00 0.034±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EJ CIL_0001EJ_0002 CGP 6:115931149-116249497

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001501 TAS skeletal system development
GO:0005515 IEA protein binding
GO:0005576 TAS extracellular region
GO:0005788 TAS endoplasmic reticulum lumen
GO:0022617 TAS extracellular matrix disassembly
GO:0030198 TAS extracellular matrix organization
GO:0030574 TAS collagen catabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105511 Col10a1-001 protein_coding Mus_musculus 0 2198

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