C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001FM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000042122-ENSDARG00000030155 CGP 7955 8:18513188-18556039
GeneTranscriptPositionBiotype
ENSDARG00000030155 (ssbp3b)
single stranded DNA binding protein 3b 		ENSDART00000039887 (ssbp3b-001) 18530378-18556039 protein_coding
ENSDART00000121984 (ssbp3b-201) 18530378-18556039 protein_coding
ENSDART00000136756 (ssbp3b-003) 18530922-18533429 protein_coding
ENSDART00000144532 (ssbp3b-002) 18530382-18550996 protein_coding
ENSDARG00000042122 (acot11b)
acyl-CoA thioesterase 11b 		ENSDART00000121660 (acot11b-201) 18513188-18526503 protein_coding
ENSDART00000122730 (acot11b-002) 18521382-18529497 protein_coding
ENSDART00000125014 (acot11b-001) 18513220-18530135 protein_coding
ENSDART00000133666 (acot11b-003) 18522991-18529520 protein_coding
ENSDART00000140324 (acot11b-005) 18515302-18517132 retained_intron
ENSDART00000142761 (acot11b-004) 18519782-18523084 retained_intron
CIL_0001FM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034853-ENSMUSG00000061887 CGP 10090 4:106744555-107049694
GeneTranscriptPositionBiotype
ENSMUSG00000034853 (Acot11)
acyl-CoA thioesterase 11 		ENSMUST00000065253 (Acot11-001) 106747235-106804998 protein_coding
ENSMUST00000102762 (Acot11-002) 106744555-106799846 protein_coding
ENSMUST00000140541 (Acot11-003) 106747391-106771556 nonsense_mediated_decay
ENSMUST00000144809 (Acot11-007) 106753714-106755960 processed_transcript
ENSMUST00000145061 (Acot11-005) 106763406-106799790 protein_coding
ENSMUST00000148688 (Acot11-006) 106763449-106800249 protein_coding
ENSMUST00000156567 (Acot11-004) 106761998-106799843 nonsense_mediated_decay
ENSMUSG00000034871 (Fam151a)
family with sequence simliarity 151, member A 		ENSMUST00000047620 (Fam151a-001) 106733889-106748292 protein_coding
ENSMUSG00000061887 (Ssbp3)
single-stranded DNA binding protein 3 		ENSMUST00000030367 (Ssbp3-001) 106911470-107049694 protein_coding
ENSMUST00000072753 (Ssbp3-002) 106911533-107048567 protein_coding
ENSMUST00000097934 (Ssbp3-006) 106911667-107048498 protein_coding
ENSMUST00000124936 (Ssbp3-007) 106955859-107048692 processed_transcript
ENSMUST00000131111 (Ssbp3-013) 107030832-107031485 processed_transcript
ENSMUST00000131440 (Ssbp3-010) 106966426-107031067 protein_coding
ENSMUST00000132506 (Ssbp3-011) 106911861-107010534 processed_transcript
ENSMUST00000133827 (Ssbp3-014) 107038202-107048519 processed_transcript
ENSMUST00000136487 (Ssbp3-016) 107046954-107048450 processed_transcript
ENSMUST00000137786 (Ssbp3-012) 107028193-107037363 processed_transcript
ENSMUST00000138475 (Ssbp3-008) 106923225-107038248 processed_transcript
ENSMUST00000141963 (Ssbp3-004) 106941698-107048543 processed_transcript
ENSMUST00000146659 (Ssbp3-003) 106912298-107048515 processed_transcript
ENSMUST00000148842 (Ssbp3-009) 106923185-107031021 processed_transcript
ENSMUST00000149926 (Ssbp3-017) 106911511-107038742 protein_coding
ENSMUST00000150915 (Ssbp3-005) 106910701-107031069 processed_transcript
ENSMUST00000156288 (Ssbp3-015) 107038233-107040657 processed_transcript
ENSMUSG00000081110 (Gm12745)
predicted gene 12745 		ENSMUST00000121767 (Gm12745-001) 106774816-106775029 processed_pseudogene
ENSMUSG00000085581 (Gm12786)
predicted gene 12786 		ENSMUST00000129617 (Gm12786-001) 107017935-107022499 antisense
ENSMUSG00000086940 (Gm12746)
predicted gene 12746 		ENSMUST00000151369 (Gm12746-001) 106841761-106847920 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001FM_0001ENSDARG00000030155ENSDART00000039887ENSDART00000121984ENSDART00000136756ENSDART00000144532ENSDARG00000042122ENSDART00000121660ENSDART00000122730ENSDART00000125014ENSDART00000133666ENSDART00000140324ENSDART00000142761CIL_0001FM_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001FM_0001ENSDARG00000030155ENSDART00000039887ENSDART00000121984ENSDARG00000042122ENSDART00000121660ENSDART00000122730ENSDART00000125014ENSDART00000142761CIL_0001FM_0002ENSMUSG00000034853ENSMUST00000065253ENSMUST00000102762ENSMUST00000140541ENSMUSG00000034871ENSMUST00000047620ENSMUSG00000061887ENSMUST00000030367ENSMUST00000072753ENSMUST00000097934ENSMUST00000133827ENSMUST00000146659ENSMUST00000149926ENSMUSG00000081110ENSMUST00000121767ENSMUSG00000085581ENSMUST00000129617ENSMUSG00000086940ENSMUST00000151369
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000030155 ENSDART00000039887 N/A N/A N/A 6.658±1.11 N/A N/A 2.467±2.10 4.602±1.69 0.172±0.00 N/A 1.466±0.00 N/A N/A N/A
ENSDART00000121984 N/A N/A N/A 10.020±3.72 N/A N/A 2.724±0.47 3.954±1.04 0.321±0.00 N/A 0.526±0.00 N/A N/A N/A
ENSDART00000136756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000042122 ENSDART00000121660 N/A N/A N/A 0.272±0.00 N/A N/A 11.501±5.26 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000122730 N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A
ENSDART00000125014 N/A N/A N/A 0.376±0.03 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000133666 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000140324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142761 N/A N/A N/A 1.097±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034853 ENSMUST00000065253 N/A 3.916±0.40 N/A N/A 1.186±0.00 5.731±1.01 N/A N/A 2.967±1.21 N/A 0.732±0.17 2.506±0.60 0.356±0.19 0.214±0.00
ENSMUST00000102762 4.524±1.50 5.110±1.05 2.921±0.48 0.650±0.14 3.127±1.25 3.935±0.93 5.611±1.30 8.901±2.47 1.316±0.95 2.676±1.03 1.687±0.41 1.965±1.06 0.263±0.08 0.222±0.02
ENSMUST00000140541 N/A 3.809±1.10 N/A 4.188±0.00 1.696±0.00 5.315±0.96 N/A 23.299±5.69 0.710±0.00 1.285±0.00 N/A 2.525±0.72 0.823±0.00 0.196±0.00
ENSMUST00000144809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000034871 ENSMUST00000047620 N/A N/A N/A N/A N/A N/A N/A 34.900±11.33 N/A N/A N/A 2.170±0.73 0.334±0.00 0.196±0.00
ENSMUSG00000061887 ENSMUST00000030367 23.598±0.19 24.046±0.00 14.004±0.98 106.268±12.30 2.873±0.73 29.508±3.33 8.489±0.00 16.352±0.12 16.952±5.63 14.932±0.05 0.804±0.00 14.512±10.11 9.862±0.12 3.502±1.82
ENSMUST00000072753 5.759±0.46 N/A 10.115±4.20 N/A N/A N/A N/A N/A 13.181±6.80 N/A 2.747±0.63 N/A 8.786±1.06 N/A
ENSMUST00000097934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.460±0.00 N/A 3.979±1.54 N/A
ENSMUST00000124936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131440 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133827 N/A N/A N/A 24.047±0.00 N/A N/A N/A N/A 21.757±0.00 N/A 3.582±0.00 21.572±2.80 7.013±1.42 2.527±0.00
ENSMUST00000136487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141963 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.522±0.00 3.037±2.48
ENSMUST00000148842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.688±0.29 N/A N/A
ENSMUST00000150915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081110 ENSMUST00000121767 N/A N/A N/A N/A 1.883±0.71 N/A N/A N/A 0.748±0.00 N/A N/A 1.092±0.00 N/A N/A
ENSMUSG00000085581 ENSMUST00000129617 0.176±0.10 0.410±0.18 0.070±0.00 0.432±0.05 0.184±0.10 0.213±0.09 0.054±0.00 0.140±0.08 0.105±0.05 0.064±0.00 N/A 0.389±0.28 0.114±0.06 0.902±0.25
ENSMUSG00000086940 ENSMUST00000151369 N/A N/A 0.053±0.00 0.046±0.00 0.125±0.08 N/A N/A N/A 0.114±0.03 0.051±0.00 N/A 0.362±0.16 0.035±0.01 0.061±0.02

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