C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: single-stranded DNA binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000141963 Ssbp3-004 ENSMUSG00000061887 10090 + 4:106941698-107048543 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085J CIL_00085J_0002 VISTA 4:106564211-107167561
CIL_0001FM CIL_0001FM_0002 CGP 4:106744555-107049694

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326956 SSBP3-012 processed_transcript Homo_sapiens 0 1637
ENST00000357475 SSBP3-001 protein_coding Homo_sapiens 0 1229
ENST00000371319 SSBP3-007 protein_coding Homo_sapiens 0 1635
ENST00000371320 SSBP3-002 protein_coding Homo_sapiens 0 1498
ENST00000395959 AC004987.9-001 processed_pseudogene Homo_sapiens 0 959
ENST00000401540 AC018865.5-001 processed_pseudogene Homo_sapiens 0 963
ENST00000417338 AC073869.2-001 processed_pseudogene Homo_sapiens 0 743
ENST00000417664 SSBP3-013 protein_coding Homo_sapiens 0 1498
ENST00000420121 SSBP3-006 retained_intron Homo_sapiens 0 765
ENST00000426150 SSBP3-004 processed_transcript Homo_sapiens 0 1197
ENST00000444533 SSBP3-005 protein_coding Homo_sapiens 0 654
ENST00000456143 LA16c-60G3.7-001 processed_pseudogene Homo_sapiens 0 889
ENST00000525990 SSBP3-014 protein_coding Homo_sapiens 0 593
ENST00000528787 SSBP3-009 processed_transcript Homo_sapiens 0 289
ENST00000528930 SSBP3-010 retained_intron Homo_sapiens 0 732
ENST00000530618 SSBP3-003 retained_intron Homo_sapiens 2e-26 122
ENST00000533209 SSBP3-008 retained_intron Homo_sapiens 0 601
ENST00000533946 SSBP3-011 processed_transcript Homo_sapiens 0 357
ENST00000546860 RP11-536C10.11-001 processed_pseudogene Homo_sapiens 0 881
ENST00000550646 RP11-597A11.3-001 processed_pseudogene Homo_sapiens 0 937
ENST00000610401 SSBP3-201 protein_coding Homo_sapiens 0 1639

Loading