C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: single-stranded DNA binding protein 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133827 Ssbp3-014 ENSMUSG00000061887 10090 + 4:107038202-107048519 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleOvaryPlacentaTestisENSMUST00000133827
Transcript ID Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000133827 24.047±0.00 21.757±0.00 3.582±0.00 21.572±2.80 7.013±1.42 2.527±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085J CIL_00085J_0002 VISTA 4:106564211-107167561
CIL_0001FM CIL_0001FM_0002 CGP 4:106744555-107049694

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326956 SSBP3-012 processed_transcript Homo_sapiens 0 941
ENST00000357475 SSBP3-001 protein_coding Homo_sapiens 0 745
ENST00000371319 SSBP3-007 protein_coding Homo_sapiens 0 941
ENST00000371320 SSBP3-002 protein_coding Homo_sapiens 0 941
ENST00000395959 AC004987.9-001 processed_pseudogene Homo_sapiens 0 444
ENST00000417664 SSBP3-013 protein_coding Homo_sapiens 0 941
ENST00000420121 SSBP3-006 retained_intron Homo_sapiens 0 228
ENST00000426150 SSBP3-004 processed_transcript Homo_sapiens 0 521
ENST00000444533 SSBP3-005 protein_coding Homo_sapiens 0 228
ENST00000456143 LA16c-60G3.7-001 processed_pseudogene Homo_sapiens 0 446
ENST00000528930 SSBP3-010 retained_intron Homo_sapiens 0 713
ENST00000546860 RP11-536C10.11-001 processed_pseudogene Homo_sapiens 0 438
ENST00000610401 SSBP3-201 protein_coding Homo_sapiens 0 944

Loading