C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001IF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104897-ENSG00000104899 CGP 9606 19:2236504-2252073
GeneTranscriptPositionBiotype
ENSG00000104886 (PLEKHJ1)
pleckstrin homology domain containing, family J member 1 		ENST00000326631 (PLEKHJ1-201) 2233156-2236320 protein_coding
ENST00000585423 (PLEKHJ1-005) 2233853-2236141 retained_intron
ENST00000586497 (PLEKHJ1-012) 2233964-2236239 retained_intron
ENST00000586608 (PLEKHJ1-007) 2233408-2236298 protein_coding
ENST00000587394 (PLEKHJ1-009) 2230084-2236272 protein_coding
ENST00000587962 (PLEKHJ1-011) 2233149-2236326 protein_coding
ENST00000588356 (PLEKHJ1-004) 2235463-2236330 retained_intron
ENST00000588450 (PLEKHJ1-003) 2233154-2236263 retained_intron
ENST00000588545 (PLEKHJ1-006) 2233355-2234331 retained_intron
ENST00000588633 (PLEKHJ1-010) 2233321-2233832 processed_transcript
ENST00000589097 (PLEKHJ1-001) 2233153-2237704 protein_coding
ENST00000589791 (PLEKHJ1-002) 2233155-2236665 processed_transcript
ENST00000591099 (PLEKHJ1-008) 2233153-2236294 protein_coding
ENSG00000104897 (SF3A2)
splicing factor 3a, subunit 2, 66kDa 		ENST00000221494 (SF3A2-001) 2236504-2248679 protein_coding
ENST00000586396 (SF3A2-002) 2237794-2246802 protein_coding
ENST00000587637 (SF3A2-008) 2245509-2247206 retained_intron
ENST00000589118 (SF3A2-005) 2236832-2245186 retained_intron
ENST00000590034 (SF3A2-004) 2243382-2244953 retained_intron
ENST00000592314 (SF3A2-006) 2236860-2247878 retained_intron
ENST00000592839 (SF3A2-003) 2236853-2245838 retained_intron
ENSG00000104899 (AMH)
anti-Mullerian hormone 		ENST00000221496 (AMH-001) 2249311-2252073 protein_coding
ENST00000589313 (AMH-003) 2249744-2251607 retained_intron
ENST00000592877 (AMH-002) 2249309-2250749 processed_transcript
CIL_0001IF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020211-ENSMUSG00000035262 CGP 10090 10:80798198-80807648
GeneTranscriptPositionBiotype
ENSMUSG00000035262 (Amh)
anti-Mullerian hormone 		ENSMUST00000036016 (Amh-201) 80805248-80807648 protein_coding
ENSMUSG00000035278 (Plekhj1)
pleckstrin homology domain containing, family J member 1 		ENSMUST00000036805 (Plekhj1-201) 80796100-80798626 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001IF_0001ENSG00000104886ENST00000326631ENST00000585423ENST00000586497ENST00000586608ENST00000587394ENST00000587962ENST00000588356ENST00000588450ENST00000588545ENST00000588633ENST00000589097ENST00000589791ENST00000591099ENSG00000104897ENST00000221494ENST00000586396ENST00000587637ENST00000589118ENST00000590034ENST00000592314ENST00000592839ENSG00000104899ENST00000221496ENST00000589313ENST00000592877CIL_0001IF_0002ENSMUSG00000035262ENSMUST00000036016ENSMUSG00000035278ENSMUST00000036805
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001IF_0001ENSG00000104886ENST00000326631ENST00000587962ENSG00000104897ENST00000221494ENST00000586396ENST00000592314ENST00000592839ENSG00000104899ENST00000221496ENST00000589313ENST00000592877CIL_0001IF_0002ENSMUSG00000035262ENSMUST00000036016ENSMUSG00000035278ENSMUST00000036805
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104886 ENST00000326631 11.710±0.00 N/A N/A 5.921±3.62 19.080±0.00 14.615±10.48 10.559±9.66 19.665±17.26 7.201±4.75 23.119±0.00 10.194±8.27 28.976±1.40 33.901±7.15 N/A
ENST00000585423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586608 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.782±0.00 N/A N/A N/A
ENST00000588356 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000104897 ENST00000221494 28.838±0.00 39.469±0.00 N/A 6.305±4.56 17.157±10.26 17.578±12.99 4.502±4.02 19.569±0.00 4.688±3.17 12.907±10.91 22.380±0.00 66.466±26.79 54.154±3.88 93.310±4.56
ENST00000586396 N/A N/A 5.888±0.00 N/A N/A N/A 0.695±0.00 N/A N/A N/A 7.534±0.00 N/A N/A N/A
ENST00000587637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592314 27.035±0.00 47.341±0.00 N/A 19.843±0.00 18.249±0.00 20.094±0.00 N/A N/A 3.547±0.00 N/A 22.079±0.00 N/A N/A N/A
ENST00000592839 N/A N/A N/A N/A N/A N/A N/A 3.376±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000104899 ENST00000221496 N/A 0.064±0.00 N/A 0.199±0.02 0.172±0.00 N/A 0.035±0.00 N/A 0.184±0.00 0.115±0.00 2.059±0.00 0.759±0.49 0.074±0.00 3.632±0.00
ENST00000589313 N/A 0.113±0.00 N/A 0.162±0.00 0.094±0.00 0.543±0.00 N/A 0.244±0.00 0.102±0.00 0.065±0.00 0.773±0.00 0.823±0.22 0.142±0.06 0.823±0.00
ENST00000592877 N/A N/A N/A 0.141±0.00 N/A 0.241±0.00 N/A 0.214±0.00 N/A N/A N/A 1.071±0.90 0.645±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000035262 ENSMUST00000036016 0.158±0.06 0.223±0.17 0.327±0.06 0.555±0.21 0.551±0.36 0.208±0.06 0.073±0.04 0.076±0.03 0.139±0.11 0.378±0.13 0.107±0.06 87.542±28.18 0.257±0.08 1.014±0.44
ENSMUSG00000035278 ENSMUST00000036805 18.659±1.49 18.862±2.24 27.101±2.08 29.536±5.62 15.453±3.55 12.587±2.76 8.440±1.60 10.128±2.78 17.589±10.77 10.796±3.73 8.000±1.91 18.477±6.57 24.959±9.66 10.492±2.33

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