C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: splicing factor 3a, subunit 2, 66kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000586396 SF3A2-002 ENSG00000104897 9606 + 19:2237794-2246802 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartMuscleENST00000586396
Transcript ID Bladder Heart Muscle
ENST00000586396 5.888±0.00 0.695±0.00 7.534±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001T8 CIL_0001T8_0001 CGP 19:2164149-2237704
CIL_0001II CIL_0001II_0001 CGP 19:2230084-2248679
CIL_0001IF CIL_0001IF_0001 CGP 19:2236504-2252073

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005634 IEA nucleus
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000151928 Sf3a2-004 protein_coding Mus_musculus 0 472
ENSMUST00000148665 Sf3a2-001 protein_coding Mus_musculus 0 472
ENSMUST00000139461 Sf3a2-003 retained_intron Mus_musculus 0 213

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