C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: splicing factor 3a, subunit 2, 66kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000592314 SF3A2-006 ENSG00000104897 9606 + 19:2236860-2247878 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonLiverMuscleENST00000592314
Transcript ID Adipose Adrenal Brain Breast Colon Liver Muscle
ENST00000592314 27.035±0.00 47.341±0.00 19.843±0.00 18.249±0.00 20.094±0.00 3.547±0.00 22.079±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001T8 CIL_0001T8_0001 CGP 19:2164149-2237704
CIL_0001II CIL_0001II_0001 CGP 19:2230084-2248679
CIL_0001IF CIL_0001IF_0001 CGP 19:2236504-2252073

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000151928 Sf3a2-004 protein_coding Mus_musculus 0 470
ENSMUST00000148665 Sf3a2-001 protein_coding Mus_musculus 0 470
ENSMUST00000139461 Sf3a2-003 retained_intron Mus_musculus 0 237

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