C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001J3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000152102-ENSG00000115762 CGP 9606 2:131047876-131353709
GeneTranscriptPositionBiotype
ENSG00000115762 (PLEKHB2)
pleckstrin homology domain containing, family B (evectins) member 2 		ENST00000234115 (PLEKHB2-001) 131104944-131149852 protein_coding
ENST00000403716 (PLEKHB2-201) 131104847-131149851 protein_coding
ENST00000404460 (PLEKHB2-002) 131105353-131353709 protein_coding
ENST00000409158 (PLEKHB2-003) 131104847-131147797 protein_coding
ENST00000409279 (PLEKHB2-005) 131118891-131147797 protein_coding
ENST00000409612 (PLEKHB2-004) 131107556-131147797 protein_coding
ENST00000438882 (PLEKHB2-202) 131104847-131149851 protein_coding
ENST00000439822 (PLEKHB2-203) 131104847-131149851 protein_coding
ENST00000482225 (PLEKHB2-008) 131105329-131127059 retained_intron
ENST00000487980 (PLEKHB2-009) 131105329-131107990 processed_transcript
ENSG00000188219 (POTEE)
POTE ankyrin domain family, member E 		ENST00000356920 (POTEE-001) 131218067-131265278 protein_coding
ENST00000358087 (POTEE-003) 131218351-131263591 nonsense_mediated_decay
ENST00000514256 (POTEE-002) 131218351-131263591 nonsense_mediated_decay
ENST00000613282 (POTEE-201) 131218351-131263700 protein_coding
ENSG00000212199 (RNU6-127P)
RNA, U6 small nuclear 127, pseudogene 		ENST00000390897 (RNU6-127P-201) 131229607-131229713 snRNA
ENSG00000225448 (AC009477.7)
 ENST00000452936 (AC009477.7-001) 131181153-131181369 processed_pseudogene
ENSG00000227817 (ARHGAP42P1)
Rho GTPase activating protein 42 pseudogene 1 		ENST00000507474 (ARHGAP42P1-001) 131328176-131330857 unprocessed_pseudogene
ENSG00000230450 (NEK2P4)
NEK2 pseudogene 4 		ENST00000425793 (NEK2P4-001) 131177618-131178946 processed_pseudogene
ENSG00000231431 (FAR2P4)
fatty acyl CoA reductase 2 pseudogene 4 		ENST00000416266 (FAR2P4-004) 131286818-131292546 processed_transcript
ENST00000425399 (FAR2P4-001) 131296843-131309068 transcribed_unprocessed_pseudogene
ENST00000560285 (FAR2P4-003) 131279290-131299819 processed_transcript
ENSG00000236516 (KLF2P4)
Kruppel-like factor 2 pseudogene 4 		ENST00000451959 (KLF2P4-001) 131299220-131300444 processed_pseudogene
ENSG00000236956 (NF1P8)
neurofibromin 1 pseudogene 8 		ENST00000415351 (NF1P8-001) 131189834-131197493 unprocessed_pseudogene
ENSG00000248796 (MED15P8)
mediator complex subunit 15 pseudogene 8 		ENST00000411601 (MED15P8-001) 131201142-131202941 unprocessed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0001J3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037503-ENSMUSG00000026123 CGP 10090 1:34813219-34879580
GeneTranscriptPositionBiotype
ENSMUSG00000026123 (Plekhb2)
pleckstrin homology domain containing, family B (evectins) member 2 		ENSMUST00000027297 (Plekhb2-001) 34849992-34879580 protein_coding
ENSMUST00000152654 (Plekhb2-003) 34851837-34863475 protein_coding
ENSMUST00000156687 (Plekhb2-002) 34849976-34873956 protein_coding
ENSMUSG00000037503 (Fam168b)
family with sequence similarity 168, member B 		ENSMUST00000047534 (Fam168b-001) 34813221-34843065 protein_coding
ENSMUST00000140534 (Fam168b-002) 34828642-34843065 retained_intron
ENSMUST00000167518 (Fam168b-201) 34813219-34843050 protein_coding
ENSMUST00000170092 (Fam168b-003) 34817235-34842964 protein_coding
ENSMUST00000185231 (Fam168b-007) 34819699-34843004 protein_coding
ENSMUST00000185279 (Fam168b-004) 34819612-34843013 processed_transcript
ENSMUST00000185469 (Fam168b-006) 34817352-34842985 nonsense_mediated_decay
ENSMUST00000191307 (Fam168b-005) 34818009-34843034 protein_coding
ENSMUSG00000037509 (Arhgef4)
Rho guanine nucleotide exchange factor (GEF) 4 		ENSMUST00000047664 (Arhgef4-001) 34801704-34813309 protein_coding
ENSMUST00000159021 (Arhgef4-006) 34750881-34807144 protein_coding
ENSMUST00000159059 (Arhgef4-007) 34801722-34806698 retained_intron
ENSMUST00000159747 (Arhgef4-004) 34678188-34812739 protein_coding
ENSMUST00000160855 (Arhgef4-003) 34801741-34808911 nonsense_mediated_decay
ENSMUST00000162599 (Arhgef4-005) 34732115-34811829 protein_coding
ENSMUST00000162760 (Arhgef4-002) 34801721-34809218 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001J3_0001ENSG00000115762ENST00000234115ENST00000403716ENST00000404460ENST00000409158ENST00000409279ENST00000409612ENST00000438882ENST00000439822ENST00000482225ENST00000487980ENSG00000188219ENST00000356920ENST00000358087ENST00000514256ENST00000613282ENSG00000212199ENST00000390897ENSG00000225448ENST00000452936ENSG00000227817ENST00000507474ENSG00000230450ENST00000425793ENSG00000231431ENST00000416266ENST00000425399ENST00000560285ENSG00000236516ENST00000451959ENSG00000236956ENST00000415351ENSG00000248796ENST00000411601CIL_0001J3_0002ENSMUSG00000026123ENSMUST00000027297ENSMUST00000152654ENSMUST00000156687ENSMUSG00000037503ENSMUST00000047534ENSMUST00000140534ENSMUST00000167518ENSMUST00000170092ENSMUST00000185231ENSMUST00000185279ENSMUST00000185469ENSMUST00000191307ENSMUSG00000037509ENSMUST00000047664ENSMUST00000159021ENSMUST00000159059ENSMUST00000159747ENSMUST00000160855ENSMUST00000162599ENSMUST00000162760
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001J3_0001ENSG00000115762ENST00000234115ENST00000403716ENST00000409158ENST00000409612ENST00000439822ENST00000482225ENSG00000188219ENST00000356920ENST00000358087ENST00000514256ENST00000613282ENSG00000212199ENST00000390897ENSG00000225448ENST00000452936ENSG00000227817ENST00000507474ENSG00000230450ENST00000425793ENSG00000231431ENST00000416266ENST00000425399ENST00000560285ENSG00000236516ENST00000451959ENSG00000236956ENST00000415351ENSG00000248796ENST00000411601CIL_0001J3_0002ENSMUSG00000026123ENSMUST00000027297ENSMUST00000156687ENSMUSG00000037503ENSMUST00000047534ENSMUST00000167518ENSMUST00000170092ENSMUST00000191307ENSMUSG00000037509ENSMUST00000047664
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115762 ENST00000234115 14.942±0.00 8.223±0.00 2.985±0.00 21.114±17.96 7.803±0.00 6.910±5.83 7.836±0.00 42.624±0.00 2.713±0.00 15.133±0.00 3.294±0.00 13.423±2.80 8.364±2.92 12.599±4.73
ENST00000403716 N/A N/A N/A 5.927±0.00 N/A N/A N/A N/A 1.521±0.00 N/A N/A N/A 2.961±0.66 4.177±0.00
ENST00000404460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409158 N/A N/A 2.594±0.00 N/A N/A 2.694±0.00 1.073±0.00 N/A 0.997±0.00 2.947±0.00 N/A 4.189±0.00 N/A N/A
ENST00000409279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409612 N/A N/A 3.477±0.00 N/A N/A N/A N/A N/A 2.220±0.00 N/A N/A 5.541±0.00 N/A N/A
ENST00000438882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439822 N/A N/A 2.414±0.00 4.203±0.00 N/A N/A N/A N/A 1.236±0.00 N/A 2.197±0.00 N/A N/A N/A
ENST00000482225 N/A N/A N/A N/A N/A 6.621±0.00 N/A N/A N/A 8.804±0.00 N/A 13.422±0.00 N/A N/A
ENST00000487980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000188219 ENST00000356920 0.007±0.00 0.007±0.00 N/A N/A 0.003±0.00 0.026±0.00 0.010±0.00 0.007±0.00 N/A 0.010±0.00 N/A 0.003±0.00 N/A 0.229±0.18
ENST00000358087 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 N/A
ENST00000514256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.190±0.00
ENST00000613282 N/A N/A N/A N/A 0.014±0.00 N/A 0.099±0.00 N/A N/A N/A N/A 0.013±0.00 N/A 0.247±0.00
ENSG00000212199 ENST00000390897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.546±0.13
ENSG00000225448 ENST00000452936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.347±0.00
ENSG00000227817 ENST00000507474 N/A N/A N/A 0.006±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 0.060±0.00
ENSG00000230450 ENST00000425793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.023±0.00 N/A 0.830±0.00
ENSG00000231431 ENST00000416266 N/A N/A N/A 0.031±0.00 N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A 0.026±0.00 0.672±0.55
ENST00000425399 N/A 0.067±0.00 N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A 0.176±0.11 0.259±0.09 3.430±1.79
ENST00000560285 N/A N/A N/A N/A 0.014±0.00 N/A N/A 0.613±0.00 N/A N/A N/A N/A 0.060±0.02 2.617±2.31
ENSG00000236516 ENST00000451959 0.134±0.00 0.290±0.00 N/A 0.696±0.19 0.061±0.00 0.163±0.00 0.139±0.00 0.311±0.22 0.026±0.00 0.163±0.00 0.075±0.00 0.175±0.00 0.388±0.20 10.944±9.96
ENSG00000236956 ENST00000415351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.034±0.00 0.411±0.00
ENSG00000248796 ENST00000411601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.132±0.00 0.336±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026123 ENSMUST00000027297 21.326±8.71 81.601±17.37 50.461±2.08 19.165±5.02 26.373±1.43 159.474±23.43 35.674±1.55 106.830±6.98 5.272±2.34 48.014±0.74 17.672±3.34 34.448±12.75 13.066±6.35 5.440±2.41
ENSMUST00000152654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.449±0.00 N/A 0.065±0.00
ENSMUSG00000037503 ENSMUST00000047534 35.085±7.45 32.666±7.23 43.118±3.84 71.515±43.40 28.293±3.55 27.332±3.31 12.800±1.13 26.367±3.07 15.915±2.14 45.081±1.71 3.865±0.89 47.407±19.54 22.531±10.34 6.120±2.86
ENSMUST00000140534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167518 N/A 19.783±1.89 6.716±0.00 N/A N/A N/A N/A N/A N/A N/A 2.818±1.09 20.501±0.00 N/A N/A
ENSMUST00000170092 38.774±11.15 74.546±10.19 N/A N/A 50.305±11.18 39.913±12.89 12.820±3.12 31.069±3.84 15.031±2.43 59.255±10.12 N/A 54.528±11.27 N/A 12.609±1.06
ENSMUST00000185231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000185469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191307 N/A 35.306±2.94 N/A N/A 33.408±2.71 24.594±3.26 14.689±1.94 22.688±0.00 N/A N/A N/A 48.032±9.22 N/A N/A
ENSMUSG00000037509 ENSMUST00000047664 N/A N/A N/A 54.071±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162599 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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