C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POTE ankyrin domain family, member E
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356920 POTEE-001 ENSG00000188219 9606 + 2:131218067-131265278 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLungOvaryTestisENST00000356920
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Lung Ovary Testis
ENST00000356920 0.007±0.00 0.007±0.00 0.003±0.00 0.026±0.00 0.010±0.00 0.007±0.00 0.010±0.00 0.003±0.00 0.229±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001J3 CIL_0001J3_0001 CGP 2:131047876-131353709

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001895 IEP retina homeostasis
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0021762 IEP substantia nigra development
GO:0070062 IDA extracellular vesicular exosome
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100497 Actb-001 protein_coding Mus_musculus 0 1424
ENSMUST00000078717 Lrrc58-001 protein_coding Mus_musculus 0 1306
ENSMUST00000106215 Actg1-201 protein_coding Mus_musculus 0 1254
ENSMUST00000071555 Actg1-001 protein_coding Mus_musculus 0 1254
ENSMUST00000121430 Gm12715-001 processed_pseudogene Mus_musculus 0 1236
ENSMUST00000082300 Gm8399-201 pseudogene Mus_musculus 0 1171
ENSDART00000054987 actb1-001 protein_coding Danio_rerio 0 1133
ENSMUST00000034453 Acta1-201 protein_coding Mus_musculus 0 1064
ENSMUST00000119947 Gm15725-001 transcribed_processed_pseudogene Mus_musculus 0 1029
ENSMUST00000167721 Actb-002 protein_coding Mus_musculus 0 1002
ENSMUST00000171419 Actb-007 protein_coding Mus_musculus 0 953
ENSDART00000055136 actc1b-201 protein_coding Danio_rerio 0 946
ENSMUST00000120059 Gm5388-001 processed_pseudogene Mus_musculus 0 939
ENSDART00000058629 acta1b-001 protein_coding Danio_rerio 0 935
ENSMUST00000121731 Actg2-002 protein_coding Mus_musculus 0 931
ENSMUST00000075161 Actg2-001 protein_coding Mus_musculus 0 931
ENSMUST00000090269 Actc1-001 protein_coding Mus_musculus 0 929
ENSMUST00000140208 Gm8464-002 processed_transcript Mus_musculus 0 918
ENSMUST00000152262 Gm4750-002 processed_transcript Mus_musculus 0 918
ENSDART00000133319 actb1-005 protein_coding Danio_rerio 0 907
ENSDART00000062370 actc1a-001 protein_coding Danio_rerio 0 902
ENSDART00000052838 acta1a-001 protein_coding Danio_rerio 0 880
ENSMUST00000146697 Gm8464-001 transcribed_processed_pseudogene Mus_musculus 0 878
ENSMUST00000151942 Gm4750-001 transcribed_processed_pseudogene Mus_musculus 0 878
ENSDART00000114549 hm:zewp0073-201 protein_coding Danio_rerio 0 869
ENSMUST00000184255 Gm17087-001 translated_processed_pseudogene Mus_musculus 0 833
ENSDART00000066430 acta2-201 protein_coding Danio_rerio 0 828
ENSDART00000080664 protein_coding Danio_rerio 0 821
ENSMUST00000118518 Gm12003-001 processed_pseudogene Mus_musculus 0 791
ENSDART00000149990 acta2-001 protein_coding Danio_rerio 0 776
ENSMUST00000131103 Actg1-002 nonsense_mediated_decay Mus_musculus 0 760
ENSMUST00000119663 Gm4760-001 processed_pseudogene Mus_musculus 0 721
ENSDART00000138324 actb1-004 protein_coding Danio_rerio 0 675
ENSMUST00000128055 Actg1-005 protein_coding Mus_musculus 0 660
ENSMUST00000141904 Actg2-005 protein_coding Mus_musculus 0 651
ENSMUST00000119420 Gm4918-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000106216 Actb-006 protein_coding Mus_musculus 0 542
ENSMUST00000152029 Actg2-004 protein_coding Mus_musculus 0 488
ENSMUST00000167386 Actb-003 processed_transcript Mus_musculus 0 473
ENSMUST00000165629 Actb-008 retained_intron Mus_musculus 0 433
ENSMUST00000062147 Actg1-006 protein_coding Mus_musculus 0 433
ENSMUST00000156343 Actg1-004 retained_intron Mus_musculus 0 403
ENSMUST00000141406 Actg1-007 retained_intron Mus_musculus 0 399
ENSMUST00000165006 Gm17228-001 processed_pseudogene Mus_musculus 0 377
ENSMUST00000184183 Gm17087-002 protein_coding Mus_musculus 0 375
ENSDART00000135318 actb1-006 retained_intron Danio_rerio 0 326
ENSDART00000141407 actb1-002 protein_coding Danio_rerio 0 326
ENSMUST00000164765 Actb-005 retained_intron Mus_musculus 0 296
ENSMUST00000124933 Actg2-006 processed_transcript Mus_musculus 0 226
ENSMUST00000163829 Actb-004 protein_coding Mus_musculus 0 213
ENSMUST00000144868 Actg1-003 retained_intron Mus_musculus 1.00053e-42 180
ENSMUST00000089616 Actg1-009 protein_coding Mus_musculus 9e-29 134

Loading