C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265271 RBM27-001 ENSG00000091009 9606 + 5:146203600-146289132 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265271
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265271 1.223±0.00 1.078±0.00 2.135±0.00 1.859±0.00 1.943±0.76 2.007±0.19 1.785±0.20 2.122±1.47 2.170±0.68 3.910±0.00 2.194±0.28 1.771±0.60 5.271±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001J0 CIL_0001J0_0002 CGP 5:146113038-146339251
CIL_0001J5 CIL_0001J5_0002 CGP 5:146203600-146340520

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046972 Rbm27-201 protein_coding Mus_musculus 0 2907
ENSMUST00000091920 Rbm27-202 protein_coding Mus_musculus 0 2571

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