C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 39, member 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000556605 SLC39A9-004 ENSG00000029364 9606 + 14:69398690-69462388 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverMuscleOvaryENST00000556605
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Muscle Ovary
ENST00000556605 7.519±0.00 14.701±0.00 9.203±0.00 8.892±0.00 12.606±0.00 10.741±0.00 10.427±0.00 2.997±0.00 10.764±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006UI CIL_0006UI_0001 CGP 14:69259277-69398627
CIL_0006UM CIL_0006UM_0001 CGP 14:69380123-69462388
CIL_0001K0 CIL_0001K0_0002 CGP 14:69398015-69531551

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006829 IEA zinc ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030001 IEA metal ion transport
GO:0046873 IEA metal ion transmembrane transporter activity
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085245 Slc39a9-201 protein_coding Mus_musculus 0 894
ENSMUST00000021559 Erh-001 protein_coding Mus_musculus 8e-32 143

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