C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001KY_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000186334-ENSG00000186335 CGP 9606 5:151276762-151347590
GeneTranscriptPositionBiotype
ENSG00000186334 (SLC36A3)
solute carrier family 36, member 3 		ENST00000335230 (SLC36A3-001) 151276762-151303766 protein_coding
ENST00000377713 (SLC36A3-002) 151277351-151303496 protein_coding
ENST00000423071 (SLC36A3-003) 151277148-151298264 retained_intron
ENSG00000186335 (SLC36A2)
solute carrier family 36 (proton/amino acid symporter), member 2 		ENST00000335244 (SLC36A2-001) 151314978-151347590 protein_coding
ENST00000518280 (SLC36A2-006) 151316193-151347528 nonsense_mediated_decay
ENST00000518617 (SLC36A2-002) 151316193-151347528 nonsense_mediated_decay
ENST00000521967 (SLC36A2-004) 151321885-151347590 protein_coding
ENST00000522829 (SLC36A2-003) 151338613-151347556 retained_intron
ENST00000523044 (SLC36A2-005) 151325151-151333324 protein_coding
ENSG00000270904 (CTC-224D3.1)
 ENST00000604421 (CTC-224D3.1-001) 151319422-151319776 processed_pseudogene
CIL_0001KY_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049491-ENSMUSG00000020264 CGP 10090 11:55124815-55185077
GeneTranscriptPositionBiotype
ENSMUSG00000020264 (Slc36a2)
solute carrier family 36 (proton/amino acid symporter), member 2 		ENSMUST00000039305 (Slc36a2-001) 55158470-55185077 protein_coding
ENSMUST00000125560 (Slc36a2-002) 55168004-55185077 processed_transcript
ENSMUSG00000049491 (Slc36a3)
solute carrier family 36 (proton/amino acid symporter), member 3 		ENSMUST00000020502 (Slc36a3-001) 55124815-55151708 protein_coding
ENSMUST00000069816 (Slc36a3-002) 55149491-55151708 protein_coding
ENSMUST00000128244 (Slc36a3-003) 55124825-55151686 nonsense_mediated_decay
ENSMUSG00000085531 (Slc36a3os)
solute carrier family 36 (proton/amino acid symporter), member 3, opposite strand 		ENSMUST00000155883 (Slc36a3os-001) 55137044-55140193 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001KY_0001ENSG00000186334ENST00000335230ENST00000377713ENST00000423071ENSG00000186335ENST00000335244ENST00000518280ENST00000518617ENST00000521967ENST00000522829ENST00000523044ENSG00000270904ENST00000604421CIL_0001KY_0002ENSMUSG00000020264ENSMUST00000039305ENSMUST00000125560ENSMUSG00000049491ENSMUST00000020502ENSMUST00000069816ENSMUST00000128244ENSMUSG00000085531ENSMUST00000155883
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001KY_0001ENSG00000186334ENST00000335230ENST00000377713ENST00000423071ENSG00000186335ENST00000335244ENST00000518280ENST00000518617ENST00000521967ENST00000522829ENST00000523044ENSG00000270904ENST00000604421CIL_0001KY_0002ENSMUSG00000020264ENSMUST00000039305ENSMUST00000125560ENSMUSG00000049491ENSMUST00000020502ENSMUST00000069816ENSMUST00000128244ENSMUSG00000085531ENSMUST00000155883
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000186334 ENST00000335230 N/A 0.042±0.00 N/A 0.012±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.768±0.00
ENST00000377713 0.060±0.00 0.039±0.00 N/A N/A 0.037±0.00 N/A N/A 0.018±0.00 N/A 0.125±0.00 N/A 0.100±0.10 N/A 4.302±3.28
ENST00000423071 0.007±0.00 0.094±0.00 N/A 0.026±0.01 0.044±0.02 0.014±0.00 0.011±0.00 0.012±0.00 0.010±0.00 N/A N/A 0.024±0.02 0.107±0.00 N/A
ENSG00000186335 ENST00000335244 0.096±0.00 0.332±0.00 8.300±0.00 0.142±0.00 0.755±0.00 0.070±0.00 0.141±0.00 1.546±0.00 0.042±0.00 0.076±0.00 7.224±0.13 0.063±0.04 0.042±0.00 0.309±0.15
ENST00000518280 N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A N/A 0.241±0.00 N/A N/A
ENST00000518617 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.249±0.00
ENST00000521967 0.108±0.00 N/A N/A 0.076±0.00 N/A N/A 0.101±0.00 N/A 0.043±0.00 0.100±0.00 N/A 0.019±0.00 N/A 0.168±0.00
ENST00000522829 N/A N/A N/A N/A 0.305±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523044 N/A N/A N/A N/A N/A 0.529±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270904 ENST00000604421 N/A N/A N/A 0.058±0.00 N/A N/A N/A 0.503±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020264 ENSMUST00000039305 81.316±13.73 87.813±28.07 1.449±0.37 0.076±0.06 157.805±28.28 1.122±0.24 20.681±0.80 10.764±2.67 7.464±5.74 37.082±3.29 0.485±0.27 10.436±3.36 1.807±2.22 0.287±0.02
ENSMUST00000125560 N/A N/A N/A 0.040±0.02 N/A N/A N/A N/A 0.060±0.00 N/A 0.195±0.09 0.445±0.00 0.504±0.62 0.032±0.00
ENSMUSG00000049491 ENSMUST00000020502 0.027±0.01 0.052±0.04 0.013±0.01 N/A 0.163±0.05 0.046±0.02 0.013±0.00 0.031±0.01 0.014±0.01 0.079±0.02 N/A 0.751±0.28 0.090±0.05 19.277±11.62
ENSMUST00000069816 0.011±0.00 N/A N/A N/A N/A N/A N/A N/A 0.011±0.00 N/A N/A N/A N/A N/A
ENSMUST00000128244 N/A 0.018±0.00 N/A N/A 0.059±0.00 0.041±0.00 N/A N/A 0.002±0.00 0.089±0.00 N/A 1.194±0.00 0.012±0.00 N/A
ENSMUSG00000085531 ENSMUST00000155883 0.202±0.11 N/A 0.102±0.00 N/A 0.362±0.10 0.142±0.00 0.173±0.00 N/A 0.060±0.05 0.175±0.09 0.318±0.00 0.722±0.53 0.589±0.35 0.299±0.20

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