C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 36 (proton/amino acid symporter), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000020502 Slc36a3-001 ENSMUSG00000049491 10090 - 11:55124815-55151708 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000020502
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000020502 0.027±0.01 0.052±0.04 0.013±0.01 0.163±0.05 0.046±0.02 0.013±0.00 0.031±0.01 0.014±0.01 0.079±0.02 0.751±0.28 0.090±0.05 19.277±11.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KO CIL_0001KO_0002 CGP 11:55098115-55151708
CIL_0001KY CIL_0001KY_0002 CGP 11:55124815-55185077

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000243389 SLC36A1-001 protein_coding Homo_sapiens 0 442
ENST00000335230 SLC36A3-001 protein_coding Homo_sapiens 0 1230
ENST00000335244 SLC36A2-001 protein_coding Homo_sapiens 0 379
ENST00000377713 SLC36A3-002 protein_coding Homo_sapiens 0 1018
ENST00000423071 SLC36A3-003 retained_intron Homo_sapiens 0 1018
ENST00000518280 SLC36A2-006 nonsense_mediated_decay Homo_sapiens 0 377
ENST00000518617 SLC36A2-002 nonsense_mediated_decay Homo_sapiens 0 305
ENST00000520701 SLC36A1-007 protein_coding Homo_sapiens 0 442
ENST00000522185 SLC36A1-012 nonsense_mediated_decay Homo_sapiens 0 255

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