C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 36 (proton/amino acid symporter), member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000128244 Slc36a3-003 ENSMUSG00000049491 10090 - 11:55124825-55151686 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverLungOvaryPlacentaENSMUST00000128244
Transcript ID Adrenal Breast Colon Liver Lung Ovary Placenta
ENSMUST00000128244 0.018±0.00 0.059±0.00 0.041±0.00 0.002±0.00 0.089±0.00 1.194±0.00 0.012±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KO CIL_0001KO_0002 CGP 11:55098115-55151708
CIL_0001KY CIL_0001KY_0002 CGP 11:55124815-55185077

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000243389 SLC36A1-001 protein_coding Homo_sapiens 0 403
ENST00000335230 SLC36A3-001 protein_coding Homo_sapiens 0 1157
ENST00000335244 SLC36A2-001 protein_coding Homo_sapiens 0 379
ENST00000377713 SLC36A3-002 protein_coding Homo_sapiens 0 1018
ENST00000423071 SLC36A3-003 retained_intron Homo_sapiens 0 1018
ENST00000518280 SLC36A2-006 nonsense_mediated_decay Homo_sapiens 0 377
ENST00000518617 SLC36A2-002 nonsense_mediated_decay Homo_sapiens 0 305
ENST00000520701 SLC36A1-007 protein_coding Homo_sapiens 0 403
ENST00000522185 SLC36A1-012 nonsense_mediated_decay Homo_sapiens 0 255

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