C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 36 (proton/amino acid symporter), member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039305 Slc36a2-001 ENSMUSG00000020264 10090 - 11:55158470-55185077 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039305
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039305 81.316±13.73 87.813±28.07 1.449±0.37 0.076±0.06 157.805±28.28 1.122±0.24 20.681±0.80 10.764±2.67 7.464±5.74 37.082±3.29 0.485±0.27 10.436±3.36 1.807±2.22 0.287±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KY CIL_0001KY_0002 CGP 11:55124815-55185077
CIL_0001KX CIL_0001KX_0002 CGP 11:55158470-55236330

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005280 IDA hydrogen:amino acid symporter activity
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0015180 IDA L-alanine transmembrane transporter activity
GO:0015187 IDA glycine transmembrane transporter activity
GO:0015193 IDA L-proline transmembrane transporter activity
GO:0015808 IDA L-alanine transport
GO:0015816 IDA glycine transport
GO:0015824 IDA proline transport
GO:0015992 IDA proton transport
GO:0016021 IEA integral component of membrane
GO:0035524 IDA proline transmembrane transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000243389 SLC36A1-001 protein_coding Homo_sapiens 0 841
ENST00000335244 SLC36A2-001 protein_coding Homo_sapiens 0 1399
ENST00000518280 SLC36A2-006 nonsense_mediated_decay Homo_sapiens 0 985
ENST00000518617 SLC36A2-002 nonsense_mediated_decay Homo_sapiens 0 638
ENST00000520701 SLC36A1-007 protein_coding Homo_sapiens 0 841
ENST00000521967 SLC36A2-004 protein_coding Homo_sapiens 0 1125
ENST00000522185 SLC36A1-012 nonsense_mediated_decay Homo_sapiens 0 281
ENST00000523044 SLC36A2-005 protein_coding Homo_sapiens 0 342

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