C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001M4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104976-ENSG00000178531 CGP 9606 19:7920316-7926166
GeneTranscriptPositionBiotype
ENSG00000104976 (SNAPC2)
small nuclear RNA activating complex, polypeptide 2, 45kDa
ENST00000221573 (SNAPC2-001) 7920316-7923250 protein_coding
ENST00000593598 (SNAPC2-004) 7920837-7921746 processed_transcript
ENST00000595035 (SNAPC2-003) 7921013-7922193 processed_transcript
ENST00000595637 (SNAPC2-006) 7920387-7922657 protein_coding
ENST00000596520 (SNAPC2-005) 7921318-7922197 processed_transcript
ENST00000597584 (SNAPC2-002) 7921015-7923250 protein_coding
ENSG00000178531 (CTXN1)
cortexin 1
ENST00000318978 (CTXN1-001) 7924485-7926166 protein_coding
CIL_0001M4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000011837-ENSMUSG00000048644 CGP 10090 8:4253102-4259274
GeneTranscriptPositionBiotype
ENSMUSG00000011837 (Snapc2)
small nuclear RNA activating complex, polypeptide 2
ENSMUST00000011981 (Snapc2-201) 4253102-4256219 protein_coding
ENSMUSG00000048644 (Ctxn1)
cortexin 1
ENSMUST00000053252 (Ctxn1-201) 4257648-4259274 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001M4_0001ENSG00000104976ENST00000221573ENST00000593598ENST00000595035ENST00000595637ENST00000596520ENST00000597584ENSG00000178531ENST00000318978CIL_0001M4_0002ENSMUSG00000011837ENSMUST00000011981ENSMUSG00000048644ENSMUST00000053252
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001M4_0001ENSG00000104976ENST00000221573ENST00000593598ENST00000595637ENST00000596520ENST00000597584ENSG00000178531ENST00000318978CIL_0001M4_0002ENSMUSG00000011837ENSMUST00000011981ENSMUSG00000048644ENSMUST00000053252
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104976 ENST00000221573 4.884±0.00 5.858±0.00 N/A 7.603±0.00 5.606±0.00 12.520±0.00 3.530±0.00 5.407±0.00 2.964±0.00 10.259±0.00 2.861±0.83 7.473±4.56 6.276±4.06 14.145±6.03
ENST00000593598 N/A N/A N/A N/A N/A N/A N/A 3.017±0.00 N/A N/A N/A N/A N/A N/A
ENST00000595035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595637 N/A N/A 0.274±0.00 N/A N/A 0.711±0.00 N/A N/A N/A N/A N/A 1.017±0.00 N/A N/A
ENST00000596520 N/A N/A 1.014±0.00 N/A 1.499±0.00 N/A N/A N/A N/A N/A N/A 3.715±1.46 9.880±0.00 9.646±0.00
ENST00000597584 7.788±0.00 8.426±0.00 N/A 2.003±0.00 1.932±1.87 5.807±5.28 N/A 2.217±2.16 1.023±0.00 1.353±0.90 N/A 11.067±7.77 5.225±1.33 12.205±5.68
ENSG00000178531 ENST00000318978 N/A N/A N/A 34.988±27.40 N/A 39.176±0.00 N/A 14.119±0.00 N/A 21.255±0.00 N/A 38.602±0.00 N/A 32.742±5.68
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000011837 ENSMUST00000011981 22.335±7.60 31.309±2.43 22.116±0.83 22.157±11.85 16.907±1.87 17.703±1.63 9.694±1.24 15.584±0.90 9.617±1.19 13.803±0.80 4.718±0.46 34.533±14.73 10.027±5.91 7.020±2.91
ENSMUSG00000048644 ENSMUST00000053252 29.558±26.17 7.183±1.88 56.424±4.75 124.817±44.14 3.271±1.47 13.371±1.89 1.910±0.38 2.569±0.40 1.999±1.54 15.228±2.39 0.375±0.16 56.320±29.33 5.109±4.04 26.421±13.29

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