C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small nuclear RNA activating complex, polypeptide 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000011981 Snapc2-201 ENSMUSG00000011837 10090 + 8:4253102-4256219 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000011981
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000011981 22.335±7.60 31.309±2.43 22.116±0.83 22.157±11.85 16.907±1.87 17.703±1.63 9.694±1.24 15.584±0.90 9.617±1.19 13.803±0.80 4.718±0.46 34.533±14.73 10.027±5.91 7.020±2.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VS CIL_0002VS_0002 CGP 8:4248214-4256219
CIL_0001M4 CIL_0001M4_0002 CGP 8:4253102-4259274

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000221573 SNAPC2-001 protein_coding Homo_sapiens 0 202
ENST00000595637 SNAPC2-006 protein_coding Homo_sapiens 8e-19 99
ENST00000597584 SNAPC2-002 protein_coding Homo_sapiens 0 202

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