C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small nuclear RNA activating complex, polypeptide 2, 45kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000597584 SNAPC2-002 ENSG00000104976 9606 + 19:7921015-7923250 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENST00000597584
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000597584 7.788±0.00 8.426±0.00 2.003±0.00 1.932±1.87 5.807±5.28 2.217±2.16 1.023±0.00 1.353±0.90 11.067±7.77 5.225±1.33 12.205±5.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VS CIL_0002VS_0001 CGP 19:7916145-7923250
CIL_0001M4 CIL_0001M4_0001 CGP 19:7920316-7926166

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000011981 Snapc2-201 protein_coding Mus_musculus 0 202

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