C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001MA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198855-ENSG00000075856 CGP 9606 12:108515185-108561400
GeneTranscriptPositionBiotype
ENSG00000075856 (SART3)
squamous cell carcinoma antigen recognized by T cells 3 		ENST00000228284 (SART3-001) 108522580-108561389 protein_coding
ENST00000431469 (SART3-005) 108523412-108561159 protein_coding
ENST00000546611 (SART3-017) 108560217-108561400 protein_coding
ENST00000546728 (SART3-003) 108522708-108561161 nonsense_mediated_decay
ENST00000546808 (SART3-012) 108531204-108535573 retained_intron
ENST00000546815 (SART3-006) 108526210-108561159 protein_coding
ENST00000547397 (SART3-011) 108523869-108526185 protein_coding
ENST00000547528 (SART3-004) 108530210-108561160 nonsense_mediated_decay
ENST00000548077 (SART3-010) 108531224-108537695 retained_intron
ENST00000548119 (SART3-009) 108537106-108538132 retained_intron
ENST00000548582 (SART3-013) 108530210-108532617 retained_intron
ENST00000550322 (SART3-008) 108543069-108549328 protein_coding
ENST00000550619 (SART3-015) 108545139-108554198 protein_coding
ENST00000551416 (SART3-014) 108543112-108544944 retained_intron
ENST00000552221 (SART3-007) 108545289-108561168 processed_transcript
ENST00000619503 (SART3-016) 108530223-108531968 retained_intron
CIL_0001MA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053334-ENSMUSG00000018974 CGP 10090 5:113735782-113771649
GeneTranscriptPositionBiotype
ENSMUSG00000018974 (Sart3)
squamous cell carcinoma antigen recognized by T cells 3 		ENSMUST00000019118 (Sart3-201) 113742446-113771649 protein_coding
ENSMUSG00000053334 (Ficd)
FIC domain containing 		ENSMUST00000065698 (Ficd-201) 113735782-113740600 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001MA_0001ENSG00000075856ENST00000228284ENST00000431469ENST00000546611ENST00000546728ENST00000546808ENST00000546815ENST00000547397ENST00000547528ENST00000548077ENST00000548119ENST00000548582ENST00000550322ENST00000550619ENST00000551416ENST00000552221ENST00000619503CIL_0001MA_0002ENSMUSG00000018974ENSMUST00000019118ENSMUSG00000053334ENSMUST00000065698
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001MA_0001ENSG00000075856ENST00000228284ENST00000546728ENST00000546815ENST00000547397ENST00000547528CIL_0001MA_0002ENSMUSG00000018974ENSMUST00000019118ENSMUSG00000053334ENSMUST00000065698
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000075856 ENST00000228284 1.217±0.00 1.721±0.00 N/A 3.141±0.00 1.953±0.00 N/A 0.746±0.20 N/A 1.266±0.00 2.462±0.00 N/A 6.079±0.00 3.170±1.17 N/A
ENST00000431469 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546728 7.383±0.00 7.690±0.00 N/A 6.385±3.56 5.563±0.00 5.016±1.30 4.271±0.00 7.573±0.00 2.702±0.16 5.074±2.65 7.139±0.00 12.305±11.29 5.883±4.56 16.484±5.12
ENST00000546808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546815 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.200±0.00 N/A N/A N/A N/A
ENST00000547397 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.866±0.00 N/A N/A
ENST00000547528 N/A N/A 3.685±0.00 4.806±0.00 N/A 2.382±0.00 1.391±0.00 4.275±0.00 5.687±0.00 N/A N/A 6.078±0.00 N/A N/A
ENST00000548077 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018974 ENSMUST00000019118 3.506±2.00 4.696±0.71 4.919±0.64 16.040±5.69 3.051±0.64 4.643±1.18 3.125±0.45 4.318±1.03 5.980±4.84 4.654±0.98 2.543±0.37 11.006±6.69 16.493±10.52 5.483±3.41
ENSMUSG00000053334 ENSMUST00000065698 3.332±0.87 6.682±0.47 2.743±0.30 2.073±0.57 3.141±1.09 4.140±0.31 2.349±0.67 2.764±0.54 2.190±1.04 5.146±0.35 2.641±0.81 3.915±0.72 4.971±1.24 1.037±0.77

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