C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: squamous cell carcinoma antigen recognized by T cells 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000547528 SART3-004 ENSG00000075856 9606 - 12:108530210-108561160 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverOvaryENST00000547528
Transcript ID Bladder Brain Colon Heart Kidney Liver Ovary
ENST00000547528 3.685±0.00 4.806±0.00 2.382±0.00 1.391±0.00 4.275±0.00 5.687±0.00 6.078±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MA CIL_0001MA_0001 CGP 12:108515185-108561400
CIL_0001M7 CIL_0001M7_0001 CGP 12:108522580-108569384

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0006396 IEA RNA processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019118 Sart3-201 protein_coding Mus_musculus 0 822

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