C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001MQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000036106-ENSDARG00000075352 CGP 7955 2:6240288-6509894
GeneTranscriptPositionBiotype
ENSDARG00000036106 (rgs18)
regulator of G-protein signaling 18 		ENSDART00000052419 (rgs18-001) 6240288-6253261 protein_coding
ENSDARG00000075352 (CABZ01077605.1)
bone morphogenetic protein/retinoic acid inducible neural-specific 3 		ENSDART00000112227 (CABZ01077605.1-201) 6439225-6509894 protein_coding
CIL_0001MQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026357-ENSMUSG00000035131 CGP 10090 1:144752683-146902472
GeneTranscriptPositionBiotype
ENSMUSG00000026357 (Rgs18)
regulator of G-protein signaling 18 		ENSMUST00000027603 (Rgs18-001) 144752683-144775435 protein_coding
ENSMUSG00000035131 (Brinp3)
bone morphogenetic protein/retinoic acid inducible neural specific 3 		ENSMUST00000074622 (Brinp3-001) 146494760-146902471 protein_coding
ENSMUST00000125331 (Brinp3-002) 146497738-146517554 retained_intron
ENSMUST00000128345 (Brinp3-004) 146497704-146902466 nonsense_mediated_decay
ENSMUST00000132847 (Brinp3-003) 146497614-146751780 protein_coding
ENSMUST00000166814 (Brinp3-201) 146497687-146902472 protein_coding
ENSMUSG00000080078 (Gm15583)
predicted gene 15583 		ENSMUST00000116191 (Gm15583-001) 146725581-146729090 processed_pseudogene
ENSMUSG00000085822 (Gm15584)
predicted gene 15584 		ENSMUST00000123231 (Gm15584-001) 146809831-146841696 antisense
ENSMUSG00000087627 (A230059L01Rik)
RIKEN cDNA A230059L01 gene 		ENSMUST00000126596 (A230059L01Rik-001) 146802965-146806022 antisense
ENSMUSG00000096352 (Gm25708)
predicted gene, 25708 		ENSMUST00000177687 (Gm25708-201) 144979484-144979585 miRNA
ENSMUSG00000099617 (RP23-251N10.2)
predicted gene 6550 		ENSMUST00000187574 (RP23-251N10.2-001) 145164951-145165943 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001MQ_0001ENSDARG00000036106ENSDART00000052419ENSDARG00000075352ENSDART00000112227CIL_0001MQ_0002ENSMUSG00000026357ENSMUST00000027603ENSMUSG00000035131ENSMUST00000074622ENSMUST00000125331ENSMUST00000128345ENSMUST00000132847ENSMUST00000166814ENSMUSG00000080078ENSMUST00000116191ENSMUSG00000085822ENSMUST00000123231ENSMUSG00000087627ENSMUST00000126596ENSMUSG00000096352ENSMUST00000177687ENSMUSG00000099617ENSMUST00000187574
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001MQ_0001ENSDARG00000036106ENSDART00000052419ENSDARG00000075352ENSDART00000112227CIL_0001MQ_0002ENSMUSG00000026357ENSMUST00000027603ENSMUSG00000035131ENSMUST00000074622ENSMUST00000125331ENSMUST00000128345ENSMUST00000132847ENSMUST00000166814ENSMUSG00000080078ENSMUST00000116191ENSMUSG00000085822ENSMUST00000123231ENSMUSG00000087627ENSMUST00000126596ENSMUSG00000096352ENSMUST00000177687ENSMUSG00000099617ENSMUST00000187574
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000036106 ENSDART00000052419 N/A N/A N/A 2.127±0.67 N/A N/A 2.063±0.43 3.817±0.94 0.037±0.00 N/A 0.803±0.00 N/A N/A N/A
ENSDARG00000075352 ENSDART00000112227 N/A N/A N/A 1.585±1.42 N/A N/A 0.129±0.01 0.190±0.00 0.034±0.00 N/A 0.224±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026357 ENSMUST00000027603 0.508±0.18 0.169±0.01 0.759±0.05 0.047±0.03 0.801±0.29 0.176±0.05 0.370±0.10 0.053±0.03 4.715±2.85 0.792±0.28 0.057±0.03 0.248±0.11 0.407±0.29 0.039±0.01
ENSMUSG00000035131 ENSMUST00000074622 N/A N/A N/A 1.174±0.65 N/A N/A N/A N/A 0.012±0.00 N/A N/A N/A N/A N/A
ENSMUST00000125331 N/A N/A N/A N/A N/A N/A N/A N/A 0.003±0.00 N/A N/A 0.012±0.00 N/A N/A
ENSMUST00000128345 0.245±0.01 0.073±0.00 N/A N/A 0.177±0.09 0.061±0.03 0.005±0.00 0.011±0.00 N/A N/A N/A 0.483±0.28 N/A N/A
ENSMUST00000132847 0.191±0.00 N/A 0.289±0.00 2.592±0.00 N/A 0.106±0.00 0.038±0.00 N/A 0.013±0.00 N/A N/A N/A 0.042±0.00 N/A
ENSMUST00000166814 0.148±0.01 0.075±0.01 0.458±0.03 4.212±0.90 0.118±0.03 0.027±0.01 0.008±0.00 0.031±0.02 0.011±0.01 0.030±0.00 0.008±0.00 0.368±0.33 0.024±0.02 1.255±0.85
ENSMUSG00000080078 ENSMUST00000116191 N/A N/A 0.586±0.01 2.030±1.36 N/A N/A N/A 0.008±0.00 2.756±0.47 N/A N/A 0.022±0.00 0.007±0.00 1.515±0.55
ENSMUSG00000085822 ENSMUST00000123231 0.087±0.00 N/A N/A 0.200±0.04 0.265±0.00 N/A 0.144±0.00 N/A 0.178±0.00 0.143±0.00 N/A 0.174±0.00 N/A 0.146±0.11
ENSMUSG00000087627 ENSMUST00000126596 0.092±0.04 0.193±0.10 0.046±0.01 0.071±0.00 0.204±0.07 0.198±0.10 0.082±0.02 0.098±0.02 0.072±0.04 0.285±0.04 0.051±0.03 0.212±0.15 0.035±0.02 0.149±0.07
ENSMUSG00000096352 ENSMUST00000177687 N/A N/A 1264.105±111.23 814.260±27.36 N/A N/A N/A N/A 289.045±120.83 N/A N/A N/A N/A N/A
ENSMUSG00000099617 ENSMUST00000187574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.065±0.02

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