C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161003 Ctdp1-003 ENSMUSG00000033323 10090 - 18:80407965-80440859 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryPlacentaTestisENSMUST00000161003
Transcript ID Muscle Ovary Placenta Testis
ENSMUST00000161003 0.624±0.00 2.622±0.38 5.475±2.57 8.897±2.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y9 CIL_0007Y9_0002 VISTA 18:80030119-80632361
CIL_0001P4 CIL_0001P4_0002 CGP 18:80294546-80469695

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000075430 CTDP1-002 protein_coding Homo_sapiens 1e-32 147
ENST00000299543 CTDP1-201 protein_coding Homo_sapiens 1e-32 147
ENST00000590599 CTDP1-004 retained_intron Homo_sapiens 5e-33 147
ENST00000591598 CTDP1-003 protein_coding Homo_sapiens 9e-33 147
ENST00000613122 CTDP1-001 protein_coding Homo_sapiens 2e-32 147

Loading