C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001R7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075257-ENSDARG00000088851 CGP 7955 12:32113013-32171515
GeneTranscriptPositionBiotype
ENSDARG00000075257 (NHLRC2 (1 of 2))
NHL repeat containing 2 		ENSDART00000113648 (NHLRC2 (1 of 2)-201) 32113013-32151324 protein_coding
ENSDARG00000088851 (adrb1)
adrenergic receptor, beta 1 		ENSDART00000130938 (adrb1-201) 32170295-32171515 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0001R7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000196865-ENSG00000043591 CGP 9606 10:113854661-114046908
GeneTranscriptPositionBiotype
ENSG00000043591 (ADRB1)
adrenoceptor beta 1 		ENST00000369295 (ADRB1-001) 114044056-114046908 protein_coding
ENSG00000196865 (NHLRC2)
NHL repeat containing 2 		ENST00000369301 (NHLRC2-001) 113854661-113917194 protein_coding
ENST00000468890 (NHLRC2-002) 113854824-113858852 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0001R7_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025078-ENSMUSG00000035283 CGP 10090 19:56548261-56724862
GeneTranscriptPositionBiotype
ENSMUSG00000025078 (Nhlrc2)
NHL repeat containing 2 		ENSMUST00000071423 (Nhlrc2-201) 56548261-56598846 protein_coding
ENSMUSG00000035283 (Adrb1)
adrenergic receptor, beta 1 		ENSMUST00000038949 (Adrb1-201) 56722372-56724862 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001R7_0001ENSDARG00000075257ENSDART00000113648ENSDARG00000088851ENSDART00000130938CIL_0001R7_0002ENSG00000043591ENST00000369295ENSG00000196865ENST00000369301ENST00000468890CIL_0001R7_0003ENSMUSG00000025078ENSMUST00000071423ENSMUSG00000035283ENSMUST00000038949
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001R7_0001ENSDARG00000075257ENSDART00000113648ENSDARG00000088851ENSDART00000130938CIL_0001R7_0002ENSG00000043591ENST00000369295ENSG00000196865ENST00000369301CIL_0001R7_0003ENSMUSG00000025078ENSMUST00000071423ENSMUSG00000035283ENSMUST00000038949
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000075257 ENSDART00000113648 N/A N/A N/A 0.281±0.08 N/A N/A 0.292±0.17 0.054±0.00 0.018±0.00 N/A 0.027±0.00 N/A N/A N/A
ENSDARG00000088851 ENSDART00000130938 N/A N/A N/A 0.805±0.58 N/A N/A 0.420±0.37 N/A 0.039±0.00 N/A 0.057±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000043591 ENST00000369295 3.642±0.00 0.413±0.00 0.065±0.00 3.883±1.61 4.067±3.95 0.535±0.30 7.124±3.77 0.730±0.00 0.191±0.14 5.078±0.70 0.083±0.00 0.669±0.79 41.078±17.44 0.406±0.17
ENSG00000196865 ENST00000369301 3.607±0.00 2.402±0.00 1.248±0.00 1.963±0.01 3.804±0.27 2.202±0.57 5.731±1.37 3.176±0.31 1.467±0.00 1.561±0.23 1.982±0.80 3.871±2.64 0.927±0.44 2.206±0.72
ENST00000468890 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025078 ENSMUST00000071423 N/A 2.756±0.70 N/A N/A 3.316±2.01 8.506±1.72 0.811±0.00 3.004±0.79 2.687±0.54 10.255±0.76 N/A 8.555±2.66 3.193±0.34 0.992±0.49
ENSMUSG00000035283 ENSMUST00000038949 2.492±0.95 4.193±1.01 0.647±0.07 4.235±4.66 4.057±2.49 3.581±0.61 8.796±1.97 1.645±0.24 0.388±0.17 37.256±12.11 0.054±0.03 1.498±0.62 8.687±8.28 1.631±0.69

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