C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001VD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175931-ENSG00000129673 CGP 9606 17:76389451-76470117
GeneTranscriptPositionBiotype
ENSG00000129673 (AANAT)
aralkylamine N-acetyltransferase 		ENST00000250615 (AANAT-001) 76453351-76470117 protein_coding
ENST00000392492 (AANAT-002) 76467569-76470117 protein_coding
ENST00000585649 (AANAT-004) 76468610-76469687 protein_coding
ENST00000587798 (AANAT-003) 76467718-76470001 nonsense_mediated_decay
ENSG00000175931 (UBE2O)
ubiquitin-conjugating enzyme E2O 		ENST00000319380 (UBE2O-001) 76389451-76453206 protein_coding
ENST00000586409 (UBE2O-002) 76395358-76453141 retained_intron
ENST00000586505 (UBE2O-004) 76401731-76405232 retained_intron
ENST00000587127 (UBE2O-003) 76389797-76399617 protein_coding
ENST00000587581 (UBE2O-006) 76397808-76399374 processed_transcript
ENST00000590658 (UBE2O-005) 76399789-76402641 protein_coding
ENSG00000242931 (RPL7P49)
ribosomal protein L7 pseudogene 49 		ENST00000471402 (RPL7P49-001) 76430417-76431124 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0001VD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020802-ENSMUSG00000020804 CGP 10090 11:116537740-116597680
GeneTranscriptPositionBiotype
ENSMUSG00000020802 (Ube2o)
ubiquitin-conjugating enzyme E2O 		ENSMUST00000082152 (Ube2o-001) 116537740-116581447 protein_coding
ENSMUST00000134102 (Ube2o-002) 116537740-116544017 processed_transcript
ENSMUST00000147851 (Ube2o-003) 116545751-116548841 processed_transcript
ENSMUSG00000020804 (Aanat)
arylalkylamine N-acetyltransferase 		ENSMUST00000021160 (Aanat-002) 116593687-116597545 nonsense_mediated_decay
ENSMUST00000123507 (Aanat-005) 116595576-116597545 nonsense_mediated_decay
ENSMUST00000132601 (Aanat-003) 116595771-116596265 processed_transcript
ENSMUST00000142978 (Aanat-004) 116586432-116597333 processed_transcript
ENSMUST00000153476 (Aanat-001) 116593687-116597680 protein_coding
ENSMUSG00000083314 (Gm11742)
predicted gene 11742 		ENSMUST00000119903 (Gm11742-001) 116550418-116550650 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001VD_0001ENSG00000129673ENST00000250615ENST00000392492ENST00000585649ENST00000587798ENSG00000175931ENST00000319380ENST00000586409ENST00000586505ENST00000587127ENST00000587581ENST00000590658ENSG00000242931ENST00000471402CIL_0001VD_0002ENSMUSG00000020802ENSMUST00000082152ENSMUST00000134102ENSMUST00000147851ENSMUSG00000020804ENSMUST00000021160ENSMUST00000123507ENSMUST00000132601ENSMUST00000142978ENSMUST00000153476ENSMUSG00000083314ENSMUST00000119903
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001VD_0001ENSG00000129673ENST00000250615ENST00000392492ENST00000585649ENST00000587798ENSG00000175931ENST00000319380ENST00000586409ENST00000587127ENST00000590658ENSG00000242931ENST00000471402CIL_0001VD_0002ENSMUSG00000020802ENSMUST00000082152ENSMUST00000134102ENSMUSG00000020804ENSMUST00000021160ENSMUST00000123507ENSMUST00000132601ENSMUST00000142978ENSMUST00000153476ENSMUSG00000083314ENSMUST00000119903
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000129673 ENST00000250615 0.022±0.00 0.373±0.00 N/A 0.033±0.00 0.051±0.00 N/A 0.018±0.00 N/A 0.044±0.00 0.082±0.00 N/A 0.026±0.00 N/A 0.499±0.07
ENST00000392492 N/A 0.268±0.00 N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A 0.040±0.00 N/A 0.085±0.00 0.590±0.00
ENST00000585649 N/A 0.593±0.00 N/A 0.135±0.00 N/A 0.066±0.00 N/A N/A N/A N/A N/A N/A 0.188±0.00 N/A
ENST00000587798 N/A N/A N/A N/A 0.054±0.00 N/A N/A N/A N/A N/A 0.066±0.00 0.314±0.00 N/A N/A
ENSG00000175931 ENST00000319380 3.731±0.00 2.781±0.00 0.146±0.00 6.064±4.01 1.210±0.78 3.134±0.00 3.563±0.00 3.116±0.00 0.614±0.00 1.450±0.00 3.565±2.97 3.859±2.97 1.869±0.92 9.466±1.18
ENST00000586409 N/A N/A N/A 0.914±0.00 0.318±0.00 0.965±0.00 0.560±0.00 N/A N/A N/A N/A 0.892±0.00 N/A N/A
ENST00000586505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587127 1.124±0.00 N/A 0.428±0.00 N/A 2.241±0.00 1.449±0.00 1.252±0.00 N/A 0.711±0.35 1.040±0.62 0.426±0.00 2.732±1.57 1.534±0.52 5.619±0.00
ENST00000587581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.938±0.00 N/A N/A N/A
ENSG00000242931 ENST00000471402 N/A 0.141±0.00 0.224±0.00 0.106±0.00 0.373±0.36 0.103±0.01 0.047±0.00 0.035±0.00 0.300±0.24 N/A N/A 0.489±0.64 0.028±0.00 0.281±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020802 ENSMUST00000082152 5.935±1.28 2.863±0.65 4.027±0.25 19.911±6.66 3.667±1.08 3.060±0.53 5.183±0.78 2.661±0.62 6.032±6.24 5.563±0.63 4.537±1.27 11.435±2.49 23.688±13.43 9.835±2.34
ENSMUST00000134102 2.686±0.24 5.240±1.66 2.724±1.10 7.984±3.79 2.618±1.64 2.081±0.86 3.204±0.26 1.499±0.58 5.089±4.08 2.109±0.71 N/A 6.025±2.37 11.305±4.61 3.276±0.77
ENSMUST00000147851 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020804 ENSMUST00000021160 N/A N/A N/A N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A 0.095±0.03 0.071±0.03 0.051±0.00
ENSMUST00000123507 0.078±0.03 0.115±0.06 N/A N/A 0.099±0.04 N/A 0.028±0.01 0.045±0.02 0.036±0.01 0.060±0.02 N/A 0.170±0.10 0.158±0.01 0.091±0.05
ENSMUST00000132601 N/A N/A N/A N/A 1.912±0.00 1.256±0.00 N/A N/A N/A 0.447±0.01 N/A 2.065±0.77 0.664±0.00 N/A
ENSMUST00000142978 N/A 0.102±0.05 N/A N/A 0.078±0.02 N/A 0.097±0.03 0.056±0.03 N/A 0.129±0.10 0.128±0.00 0.202±0.08 0.240±0.08 0.077±0.00
ENSMUST00000153476 0.053±0.00 N/A N/A 0.184±0.00 0.051±0.00 0.065±0.04 N/A N/A 0.038±0.02 0.135±0.00 0.057±0.00 0.117±0.05 0.043±0.00 0.100±0.00
ENSMUSG00000083314 ENSMUST00000119903 N/A N/A 0.502±0.17 0.336±0.18 N/A N/A N/A N/A 0.494±0.05 N/A N/A 1.197±0.46 0.820±0.00 N/A

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