C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2O
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000319380 UBE2O-001 ENSG00000175931 9606 - 17:76389451-76453206 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000319380
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000319380 3.731±0.00 2.781±0.00 0.146±0.00 6.064±4.01 1.210±0.78 3.134±0.00 3.563±0.00 3.116±0.00 0.614±0.00 1.450±0.00 3.565±2.97 3.859±2.97 1.869±0.92 9.466±1.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0001 VISTA 17:75822026-76422503
CIL_00079O CIL_00079O_0001 CGP 17:76376584-76453206
CIL_0001VD CIL_0001VD_0001 CGP 17:76389451-76470117

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006513 IDA protein monoubiquitination
GO:0016881 IEA acid-amino acid ligase activity
GO:0030513 IDA positive regulation of BMP signaling pathway
GO:0042147 IMP retrograde transport, endosome to Golgi
GO:0044822 IDA poly(A) RNA binding
GO:0070534 IMP protein K63-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000082152 Ube2o-001 protein_coding Mus_musculus 0 4723
ENSMUST00000134102 Ube2o-002 processed_transcript Mus_musculus 0 2684
ENSMUST00000147851 Ube2o-003 processed_transcript Mus_musculus 0 520

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