C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2O
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000082152 Ube2o-001 ENSMUSG00000020802 10090 - 11:116537740-116581447 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000082152
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000082152 5.935±1.28 2.863±0.65 4.027±0.25 19.911±6.66 3.667±1.08 3.060±0.53 5.183±0.78 2.661±0.62 6.032±6.24 5.563±0.63 4.537±1.27 11.435±2.49 23.688±13.43 9.835±2.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0002 VISTA 11:116019003-116619995
CIL_00079O CIL_00079O_0002 CGP 11:116530925-116581447
CIL_0001VD CIL_0001VD_0002 CGP 11:116537740-116597680

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 ISS nucleus
GO:0005737 ISS cytoplasm
GO:0006513 ISS protein monoubiquitination
GO:0016881 IEA acid-amino acid ligase activity
GO:0030513 ISS positive regulation of BMP signaling pathway
GO:0042147 ISS retrograde transport, endosome to Golgi
GO:0044822 IEA poly(A) RNA binding
GO:0070534 ISS protein K63-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319380 UBE2O-001 protein_coding Homo_sapiens 0 4723
ENST00000586409 UBE2O-002 retained_intron Homo_sapiens 0 3393
ENST00000586505 UBE2O-004 retained_intron Homo_sapiens 0 263
ENST00000587127 UBE2O-003 protein_coding Homo_sapiens 0 2894
ENST00000587581 UBE2O-006 processed_transcript Homo_sapiens 0 630
ENST00000590658 UBE2O-005 protein_coding Homo_sapiens 0 584

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