C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001VS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000110887-ENSG00000166111 CGP 9606 12:108858932-109021240
GeneTranscriptPositionBiotype
ENSG00000110887 (DAO)
D-amino-acid oxidase 		ENST00000228476 (DAO-001) 108880030-108901043 protein_coding
ENST00000546552 (DAO-010) 108898472-108900493 retained_intron
ENST00000547122 (DAO-003) 108880091-108901039 nonsense_mediated_decay
ENST00000547166 (DAO-009) 108880351-108894345 protein_coding
ENST00000547768 (DAO-008) 108880109-108899432 protein_coding
ENST00000548052 (DAO-007) 108858932-108883771 processed_transcript
ENST00000549215 (DAO-005) 108880140-108900931 nonsense_mediated_decay
ENST00000551281 (DAO-006) 108858932-108900921 protein_coding
ENSG00000201324 (RNU6-361P)
RNA, U6 small nuclear 361, pseudogene 		ENST00000364454 (RNU6-361P-201) 108926435-108926541 snRNA
CIL_0001VS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042096-ENSMUSG00000042078 CGP 10090 5:114003703-114091570
GeneTranscriptPositionBiotype
ENSMUSG00000042078 (Svop)
SV2 related protein 		ENSMUST00000058472 (Svop-001) 114026910-114091570 protein_coding
ENSMUST00000134790 (Svop-003) 114028125-114065218 processed_transcript
ENSMUST00000140151 (Svop-002) 114053767-114091380 retained_intron
ENSMUST00000149480 (Svop-005) 114034951-114042881 retained_intron
ENSMUST00000150106 (Svop-004) 114054534-114091367 protein_coding
ENSMUSG00000042096 (Dao)
D-amino acid oxidase 		ENSMUST00000086599 (Dao-002) 114003884-114025449 protein_coding
ENSMUST00000112292 (Dao-001) 114003703-114025449 protein_coding
ENSMUST00000161610 (Dao-003) 114004808-114025449 protein_coding
ENSMUST00000162214 (Dao-004) 114017092-114020004 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001VS_0001ENSG00000110887ENST00000228476ENST00000546552ENST00000547122ENST00000547166ENST00000547768ENST00000548052ENST00000549215ENST00000551281ENSG00000201324ENST00000364454CIL_0001VS_0002ENSMUSG00000042078ENSMUST00000058472ENSMUST00000134790ENSMUST00000140151ENSMUST00000149480ENSMUST00000150106ENSMUSG00000042096ENSMUST00000086599ENSMUST00000112292ENSMUST00000161610ENSMUST00000162214
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001VS_0001ENSG00000110887ENST00000228476ENST00000546552ENST00000547122ENST00000547166ENST00000547768ENST00000548052ENST00000549215ENST00000551281ENSG00000201324ENST00000364454CIL_0001VS_0002ENSMUSG00000042078ENSMUST00000058472ENSMUST00000134790ENSMUST00000140151ENSMUST00000149480ENSMUST00000150106ENSMUSG00000042096ENSMUST00000086599ENSMUST00000112292ENSMUST00000161610ENSMUST00000162214
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110887 ENST00000228476 N/A N/A 1.298±0.00 0.358±0.00 N/A N/A N/A 3.663±2.02 6.304±0.00 N/A N/A 0.159±0.00 N/A N/A
ENST00000546552 N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547122 N/A N/A N/A N/A 0.034±0.00 N/A N/A 1.204±0.00 N/A N/A N/A 0.034±0.00 0.183±0.00 0.015±0.00
ENST00000547166 N/A N/A 3.965±0.00 N/A 0.032±0.00 0.281±0.00 N/A N/A N/A N/A N/A 0.205±0.00 N/A 0.174±0.07
ENST00000547768 N/A 0.028±0.00 N/A N/A N/A 0.213±0.00 N/A 18.607±0.00 N/A N/A 0.103±0.00 N/A N/A N/A
ENST00000548052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.102±0.00
ENST00000549215 N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A 0.030±0.00
ENST00000551281 N/A N/A N/A 0.841±0.00 0.081±0.00 N/A N/A 1.090±0.00 4.915±0.00 0.042±0.00 N/A N/A N/A 0.261±0.00
ENSG00000201324 ENST00000364454 N/A N/A N/A 0.780±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042078 ENSMUST00000058472 0.009±0.00 0.718±0.27 0.010±0.00 22.443±7.49 0.013±0.00 0.183±0.07 0.017±0.00 0.157±0.07 0.032±0.05 0.013±0.00 0.020±0.00 0.073±0.05 0.089±0.04 N/A
ENSMUST00000134790 N/A 0.290±0.00 0.036±0.02 N/A 0.048±0.00 0.262±0.11 0.046±0.01 0.183±0.01 0.023±0.00 0.004±0.00 N/A 0.062±0.05 0.022±0.00 4.335±0.28
ENSMUST00000140151 N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149480 N/A N/A N/A N/A 0.129±0.00 N/A N/A N/A 0.010±0.00 N/A N/A 0.088±0.00 N/A N/A
ENSMUST00000150106 N/A N/A 0.030±0.00 N/A N/A 0.226±0.00 0.078±0.00 N/A N/A N/A N/A 0.065±0.00 N/A N/A
ENSMUSG00000042096 ENSMUST00000086599 N/A 0.012±0.00 N/A 0.034±0.00 0.095±0.04 N/A 0.023±0.01 N/A 0.009±0.00 0.096±0.04 N/A 0.208±0.11 0.672±0.08 0.090±0.00
ENSMUST00000112292 N/A N/A N/A N/A N/A 0.050±0.00 N/A 139.222±44.90 0.020±0.01 0.089±0.00 N/A 0.499±0.17 0.868±0.44 0.078±0.04
ENSMUST00000161610 0.109±0.03 0.011±0.00 N/A 0.104±0.00 0.021±0.00 N/A N/A N/A 0.008±0.00 N/A N/A 0.184±0.00 1.392±0.64 N/A
ENSMUST00000162214 N/A 0.098±0.00 0.057±0.01 0.086±0.06 N/A 0.109±0.00 0.046±0.00 N/A 0.046±0.03 0.087±0.03 0.094±0.06 0.211±0.11 N/A 0.114±0.04

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