C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001VS_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000110887-ENSG00000166111 CGP 9606 12:108858932-109021240
GeneTranscriptPositionBiotype
ENSG00000110887 (DAO)
D-amino-acid oxidase 		ENST00000228476 (DAO-001) 108880030-108901043 protein_coding
ENST00000546552 (DAO-010) 108898472-108900493 retained_intron
ENST00000547122 (DAO-003) 108880091-108901039 nonsense_mediated_decay
ENST00000547166 (DAO-009) 108880351-108894345 protein_coding
ENST00000547768 (DAO-008) 108880109-108899432 protein_coding
ENST00000548052 (DAO-007) 108858932-108883771 processed_transcript
ENST00000549215 (DAO-005) 108880140-108900931 nonsense_mediated_decay
ENST00000551281 (DAO-006) 108858932-108900921 protein_coding
ENSG00000201324 (RNU6-361P)
RNA, U6 small nuclear 361, pseudogene 		ENST00000364454 (RNU6-361P-201) 108926435-108926541 snRNA

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0001VS_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000042096-ENSMUSG00000042078 CGP 10090 5:114003703-114091570
GeneTranscriptPositionBiotype
ENSMUSG00000042078 (Svop)
SV2 related protein 		ENSMUST00000058472 (Svop-001) 114026910-114091570 protein_coding
ENSMUST00000134790 (Svop-003) 114028125-114065218 processed_transcript
ENSMUST00000140151 (Svop-002) 114053767-114091380 retained_intron
ENSMUST00000149480 (Svop-005) 114034951-114042881 retained_intron
ENSMUST00000150106 (Svop-004) 114054534-114091367 protein_coding
ENSMUSG00000042096 (Dao)
D-amino acid oxidase 		ENSMUST00000086599 (Dao-002) 114003884-114025449 protein_coding
ENSMUST00000112292 (Dao-001) 114003703-114025449 protein_coding
ENSMUST00000161610 (Dao-003) 114004808-114025449 protein_coding
ENSMUST00000162214 (Dao-004) 114017092-114020004 retained_intron

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001VS_0001ENSG00000110887ENST00000228476ENST00000546552ENST00000547122ENST00000547166ENST00000547768ENST00000548052ENST00000549215ENST00000551281ENSG00000201324ENST00000364454CIL_0001VS_0002ENSMUSG00000042078ENSMUST00000058472ENSMUST00000134790ENSMUST00000140151ENSMUST00000149480ENSMUST00000150106ENSMUSG00000042096ENSMUST00000086599ENSMUST00000112292ENSMUST00000161610ENSMUST00000162214
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001VS_0001ENSG00000110887ENST00000228476ENST00000546552ENST00000547122ENST00000547166ENST00000547768ENST00000548052ENST00000549215ENST00000551281ENSG00000201324ENST00000364454CIL_0001VS_0002ENSMUSG00000042078ENSMUST00000058472ENSMUST00000134790ENSMUST00000140151ENSMUST00000149480ENSMUST00000150106ENSMUSG00000042096ENSMUST00000086599ENSMUST00000112292ENSMUST00000161610ENSMUST00000162214
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110887 ENST00000228476 N/A N/A 1.298±0.00 0.358±0.00 N/A N/A N/A 3.663±2.02 6.304±0.00 N/A N/A 0.159±0.00 N/A N/A
ENST00000546552 N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547122 N/A N/A N/A N/A 0.034±0.00 N/A N/A 1.204±0.00 N/A N/A N/A 0.034±0.00 0.183±0.00 0.015±0.00
ENST00000547166 N/A N/A 3.965±0.00 N/A 0.032±0.00 0.281±0.00 N/A N/A N/A N/A N/A 0.205±0.00 N/A 0.174±0.07
ENST00000547768 N/A 0.028±0.00 N/A N/A N/A 0.213±0.00 N/A 18.607±0.00 N/A N/A 0.103±0.00 N/A N/A N/A
ENST00000548052 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.102±0.00
ENST00000549215 N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A 0.030±0.00
ENST00000551281 N/A N/A N/A 0.841±0.00 0.081±0.00 N/A N/A 1.090±0.00 4.915±0.00 0.042±0.00 N/A N/A N/A 0.261±0.00
ENSG00000201324 ENST00000364454 N/A N/A N/A 0.780±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042078 ENSMUST00000058472 0.009±0.00 0.718±0.27 0.010±0.00 22.443±7.49 0.013±0.00 0.183±0.07 0.017±0.00 0.157±0.07 0.032±0.05 0.013±0.00 0.020±0.00 0.073±0.05 0.089±0.04 N/A
ENSMUST00000134790 N/A 0.290±0.00 0.036±0.02 N/A 0.048±0.00 0.262±0.11 0.046±0.01 0.183±0.01 0.023±0.00 0.004±0.00 N/A 0.062±0.05 0.022±0.00 4.335±0.28
ENSMUST00000140151 N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149480 N/A N/A N/A N/A 0.129±0.00 N/A N/A N/A 0.010±0.00 N/A N/A 0.088±0.00 N/A N/A
ENSMUST00000150106 N/A N/A 0.030±0.00 N/A N/A 0.226±0.00 0.078±0.00 N/A N/A N/A N/A 0.065±0.00 N/A N/A
ENSMUSG00000042096 ENSMUST00000086599 N/A 0.012±0.00 N/A 0.034±0.00 0.095±0.04 N/A 0.023±0.01 N/A 0.009±0.00 0.096±0.04 N/A 0.208±0.11 0.672±0.08 0.090±0.00
ENSMUST00000112292 N/A N/A N/A N/A N/A 0.050±0.00 N/A 139.222±44.90 0.020±0.01 0.089±0.00 N/A 0.499±0.17 0.868±0.44 0.078±0.04
ENSMUST00000161610 0.109±0.03 0.011±0.00 N/A 0.104±0.00 0.021±0.00 N/A N/A N/A 0.008±0.00 N/A N/A 0.184±0.00 1.392±0.64 N/A
ENSMUST00000162214 N/A 0.098±0.00 0.057±0.01 0.086±0.06 N/A 0.109±0.00 0.046±0.00 N/A 0.046±0.03 0.087±0.03 0.094±0.06 0.211±0.11 N/A 0.114±0.04

Loading