C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SV2 related protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134790 Svop-003 ENSMUSG00000042078 10090 - 5:114028125-114065218 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000134790
Transcript ID Adrenal Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000134790 0.290±0.00 0.036±0.02 0.048±0.00 0.262±0.11 0.046±0.01 0.183±0.01 0.023±0.00 0.004±0.00 0.062±0.05 0.022±0.00 4.335±0.28

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VS CIL_0001VS_0002 CGP 5:114003703-114091570
CIL_0001VR CIL_0001VR_0002 CGP 5:114026910-114123506

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000546618 SVOP-003 protein_coding Homo_sapiens 0 246
ENST00000550436 SVOP-004 nonsense_mediated_decay Homo_sapiens 0 451
ENST00000551211 SVOP-005 retained_intron Homo_sapiens 8.40779e-45 183
ENST00000610966 SVOP-001 protein_coding Homo_sapiens 0 1792

Loading