C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SV2 related protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000150106 Svop-004 ENSMUSG00000042078 10090 - 5:114054534-114091367 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonHeartOvaryENSMUST00000150106
Transcript ID Bladder Colon Heart Ovary
ENSMUST00000150106 0.030±0.00 0.226±0.00 0.078±0.00 0.065±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001VS CIL_0001VS_0002 CGP 5:114003703-114091570
CIL_0001VR CIL_0001VR_0002 CGP 5:114026910-114123506

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000546618 SVOP-003 protein_coding Homo_sapiens 0 309
ENST00000548229 SVOP-002 retained_intron Homo_sapiens 0 307
ENST00000550436 SVOP-004 nonsense_mediated_decay Homo_sapiens 5.04467e-44 182
ENST00000610966 SVOP-001 protein_coding Homo_sapiens 0 599

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