C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB3B, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000003502 Rab3b-003 ENSMUSG00000003411 10090 + 4:108890290-108941188 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003502
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003502 0.504±0.29 20.720±8.37 1.199±0.11 19.031±9.02 0.380±0.17 17.798±2.62 1.636±0.24 6.458±0.72 0.592±0.35 0.725±0.20 0.131±0.07 1.194±0.82 1.765±1.03 2.324±1.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001W2 CIL_0001W2_0002 CGP 4:108879063-109061777

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005886 IEA plasma membrane
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008021 IDA synaptic vesicle
GO:0015031 IEA protein transport
GO:0017157 IDA regulation of exocytosis
GO:0018125 IDA peptidyl-cysteine methylation
GO:0030141 IDA secretory granule

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000222256 RAB3A-001 protein_coding Homo_sapiens 0 496
ENST00000464076 RAB3A-002 protein_coding Homo_sapiens 0 322
ENST00000481914 RAB3A-003 protein_coding Homo_sapiens 0 340

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