C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001WC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000062355-ENSDARG00000042850 CGP 7955 22:17459191-17478545
GeneTranscriptPositionBiotype
ENSDARG00000042850 (nphs2)
nephrosis 2, idiopathic, steroid-resistant (podocin) 		ENSDART00000062891 (nphs2-201) 17473251-17478545 protein_coding
ENSDART00000136119 (nphs2-001) 17473247-17478545 protein_coding
ENSDART00000144505 (nphs2-002) 17475717-17478237 processed_transcript
ENSDARG00000062355 (axdnd1)
axonemal dynein light chain domain containing 1 		ENSDART00000090069 (axdnd1-201) 17459191-17472786 protein_coding
ENSDART00000136908 (axdnd1-001) 17470117-17472794 protein_coding
CIL_0001WC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162779-ENSG00000116218 CGP 9606 1:179365720-179575952
GeneTranscriptPositionBiotype
ENSG00000116218 (NPHS2)
nephrosis 2, idiopathic, steroid-resistant (podocin) 		ENST00000367615 (NPHS2-001) 179550539-179575933 protein_coding
ENST00000367616 (NPHS2-002) 179550539-179575952 protein_coding
ENSG00000224620 (MEF2AP1)
myocyte enhancer factor 2A pseudogene 1 		ENST00000454867 (MEF2AP1-001) 179447578-179448440 processed_pseudogene
ENSG00000236539 (HNRNPA1P54)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 54 		ENST00000411857 (HNRNPA1P54-001) 179447602-179457315 processed_pseudogene
ENSG00000261250 (RP11-545A16.1)
 ENST00000569644 (RP11-545A16.1-001) 179543201-179548922 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001WC_0001ENSDARG00000042850ENSDART00000062891ENSDART00000136119ENSDART00000144505ENSDARG00000062355ENSDART00000090069ENSDART00000136908CIL_0001WC_0002ENSG00000116218ENST00000367615ENST00000367616ENSG00000224620ENST00000454867ENSG00000236539ENST00000411857ENSG00000261250ENST00000569644
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001WC_0001ENSDARG00000042850ENSDART00000062891ENSDART00000136119ENSDART00000144505ENSDARG00000062355ENSDART00000090069ENSDART00000136908CIL_0001WC_0002ENSG00000116218ENST00000367615ENST00000367616ENSG00000224620ENST00000454867ENSG00000236539ENST00000411857ENSG00000261250ENST00000569644
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042850 ENSDART00000062891 N/A N/A N/A 0.109±0.05 N/A N/A 0.114±0.00 3.692±0.31 N/A N/A 1.233±0.00 N/A N/A N/A
ENSDART00000136119 N/A N/A N/A 0.094±0.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000144505 N/A N/A N/A 0.202±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000062355 ENSDART00000090069 N/A N/A N/A 0.568±0.23 N/A N/A 0.123±0.07 0.676±0.63 N/A N/A 1.378±0.00 N/A N/A N/A
ENSDART00000136908 N/A N/A N/A 0.277±0.00 N/A N/A 0.434±0.00 0.776±0.00 0.041±0.00 N/A 0.899±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000116218 ENST00000367615 N/A N/A 9.634±0.00 N/A N/A N/A N/A 51.963±0.00 0.081±0.00 N/A N/A N/A N/A N/A
ENST00000367616 N/A N/A 4.671±0.00 N/A 0.232±0.00 N/A N/A 15.505±0.00 0.187±0.00 N/A N/A N/A N/A N/A
ENSG00000224620 ENST00000454867 N/A N/A N/A 0.270±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000236539 ENST00000411857 0.194±0.00 0.442±0.00 N/A 0.111±0.11 0.101±0.09 0.143±0.00 0.069±0.06 N/A 0.070±0.00 0.090±0.06 0.048±0.00 0.052±0.04 0.044±0.04 0.399±0.00
ENSG00000261250 ENST00000569644 0.046±0.00 0.057±0.00 0.120±0.00 0.052±0.00 0.045±0.00 0.203±0.18 0.032±0.00 0.159±0.00 0.013±0.00 0.055±0.00 0.003±0.00 0.009±0.00 N/A 0.134±0.09

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