C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001X3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000090273-ENSG00000090273 CGP 9606 1:26900238-26946862
GeneTranscriptPositionBiotype
ENSG00000090273 (NUDC)
nudC nuclear distribution protein
ENST00000321265 (NUDC-001) 26921726-26946862 protein_coding
ENST00000435827 (NUDC-003) 26900238-26942776 protein_coding
ENST00000452707 (NUDC-002) 26922142-26942776 protein_coding
ENST00000484772 (NUDC-004) 26945135-26946184 processed_transcript
ENSG00000131910 (NR0B2)
nuclear receptor subfamily 0, group B, member 2
ENST00000254227 (NR0B2-001) 26911489-26913966 protein_coding
ENSG00000198746 (GPATCH3)
G patch domain containing 3
ENST00000361720 (GPATCH3-001) 26890489-26900466 protein_coding
ENST00000445019 (GPATCH3-003) 26890488-26893448 protein_coding
ENST00000450844 (GPATCH3-002) 26891057-26892892 protein_coding
CIL_0001X3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028851-ENSMUSG00000037583 CGP 10090 4:133532542-133556536
GeneTranscriptPositionBiotype
ENSMUSG00000028851 (Nudc)
nuclear distribution gene C homolog (Aspergillus)
ENSMUST00000030665 (Nudc-001) 133532542-133545996 protein_coding
ENSMUST00000141860 (Nudc-002) 133533142-133533437 processed_transcript
ENSMUST00000148612 (Nudc-003) 133534228-133535927 processed_transcript
ENSMUSG00000037583 (Nr0b2)
nuclear receptor subfamily 0, group B, member 2
ENSMUST00000042706 (Nr0b2-001) 133553376-133556536 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001X3_0001ENSG00000090273ENST00000321265ENST00000435827ENST00000452707ENST00000484772ENSG00000131910ENST00000254227ENSG00000198746ENST00000361720ENST00000445019ENST00000450844CIL_0001X3_0002ENSMUSG00000028851ENSMUST00000030665ENSMUST00000141860ENSMUST00000148612ENSMUSG00000037583ENSMUST00000042706
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001X3_0001ENSG00000090273ENST00000321265ENST00000452707ENSG00000131910ENST00000254227ENSG00000198746ENST00000361720CIL_0001X3_0002ENSMUSG00000028851ENSMUST00000030665ENSMUST00000141860ENSMUST00000148612ENSMUSG00000037583ENSMUST00000042706
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000090273 ENST00000321265 11.728±0.00 10.483±0.00 4.564±0.00 5.830±0.00 15.334±11.76 17.964±14.87 3.587±1.66 13.288±5.25 11.686±6.56 31.037±27.94 N/A 60.998±43.11 58.667±5.17 49.382±19.24
ENST00000435827 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.472±0.00 N/A N/A
ENST00000484772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000131910 ENST00000254227 N/A 0.129±0.00 N/A N/A N/A 0.237±0.00 0.542±0.50 2.786±0.89 19.712±0.00 0.690±0.19 0.678±0.00 1.048±0.65 N/A 0.150±0.07
ENSG00000198746 ENST00000361720 N/A 10.297±0.00 N/A 1.317±0.00 3.219±2.61 0.606±0.00 0.640±0.00 N/A N/A 0.716±0.00 N/A 0.972±0.00 10.102±2.47 N/A
ENST00000445019 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028851 ENSMUST00000030665 25.607±6.06 35.322±4.56 47.191±0.76 99.580±93.21 13.709±3.22 18.095±1.39 23.298±2.55 30.526±5.19 61.689±38.33 34.736±0.54 29.479±1.54 54.731±49.94 133.232±123.72 58.347±18.01
ENSMUST00000141860 N/A N/A N/A 1701.260±0.00 N/A N/A N/A N/A N/A N/A N/A 1692.880±0.00 1488.436±838.51 616.461±0.00
ENSMUST00000148612 N/A N/A N/A 70.078±0.00 N/A N/A N/A N/A N/A N/A N/A 80.461±0.00 37.456±17.68 120.143±0.00
ENSMUSG00000037583 ENSMUST00000042706 0.111±0.03 89.128±20.19 0.008±0.00 0.024±0.02 0.311±0.21 0.367±0.30 11.823±4.79 2.499±0.32 46.826±48.29 0.176±0.06 N/A 4.413±2.17 0.089±0.01 0.169±0.07

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