C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nudC nuclear distribution protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000321265 NUDC-001 ENSG00000090273 9606 + 1:26921726-26946862 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000321265
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000321265 11.728±0.00 10.483±0.00 4.564±0.00 5.830±0.00 15.334±11.76 17.964±14.87 3.587±1.66 13.288±5.25 11.686±6.56 31.037±27.94 60.998±43.11 58.667±5.17 49.382±19.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T4 CIL_0007T4_0001 VISTA 1:26423129-27024414
CIL_0001X3 CIL_0001X3_0001 CGP 1:26900238-26946862

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0005515 IPI protein binding
GO:0005654 TAS nucleoplasm
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005874 IEA microtubule
GO:0007067 IEA mitotic nuclear division
GO:0007275 TAS multicellular organismal development
GO:0008283 TAS cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030665 Nudc-001 protein_coding Mus_musculus 0 1323
ENSMUST00000148612 Nudc-003 processed_transcript Mus_musculus 0 676
ENSMUST00000141860 Nudc-002 processed_transcript Mus_musculus 0 202
ENSMUST00000117445 Spata22-002 protein_coding Mus_musculus 0.000000000000003 88

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