C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear distribution gene C homolog (Aspergillus)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030665 Nudc-001 ENSMUSG00000028851 10090 - 4:133532542-133545996 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030665
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030665 25.607±6.06 35.322±4.56 47.191±0.76 99.580±93.21 13.709±3.22 18.095±1.39 23.298±2.55 30.526±5.19 61.689±38.33 34.736±0.54 29.479±1.54 54.731±49.94 133.232±123.72 58.347±18.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T4 CIL_0007T4_0002 VISTA 4:133429051-134030305
CIL_0001X3 CIL_0001X3_0002 CGP 4:133532542-133556536

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0007067 IEA mitotic nuclear division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000010992 nudc-201 protein_coding Danio_rerio 0 390
ENST00000321265 NUDC-001 protein_coding Homo_sapiens 0 1323
ENST00000435827 NUDC-003 protein_coding Homo_sapiens 0 606
ENST00000437039 AC009948.7-001 processed_pseudogene Homo_sapiens 0 747
ENST00000439252 AC012066.1-001 processed_pseudogene Homo_sapiens 0 715
ENST00000452707 NUDC-002 protein_coding Homo_sapiens 0 604
ENST00000484772 NUDC-004 processed_transcript Homo_sapiens 0 215

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