C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001XL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000162882-ENSG00000152518 CGP 9606 2:42767089-43226609
GeneTranscriptPositionBiotype
ENSG00000152518 (ZFP36L2)
ZFP36 ring finger protein-like 2 		ENST00000282388 (ZFP36L2-001) 43222402-43226609 protein_coding
ENST00000620081 (ZFP36L2-201) 43224235-43226379 protein_coding
ENSG00000162882 (HAAO)
3-hydroxyanthranilate 3,4-dioxygenase 		ENST00000294973 (HAAO-001) 42767089-42792592 protein_coding
ENST00000402268 (HAAO-005) 42782787-42792567 retained_intron
ENST00000402698 (HAAO-002) 42767120-42792574 retained_intron
ENST00000404451 (HAAO-006) 42767667-42792531 retained_intron
ENST00000406007 (HAAO-007) 42767089-42769893 retained_intron
ENST00000406924 (HAAO-008) 42769887-42792593 retained_intron
ENST00000431905 (HAAO-004) 42769711-42792572 protein_coding
ENSG00000207087 (RNU6-242P)
RNA, U6 small nuclear 242, pseudogene 		ENST00000384359 (RNU6-242P-201) 43091388-43091494 snRNA
ENSG00000224739 (AC016735.1)
 ENST00000457457 (AC016735.1-001) 43001355-43006060 lincRNA
ENSG00000226491 (FTOP1)
fat mass and obesity associated pseudogene 1 		ENST00000419363 (FTOP1-001) 42797225-42798712 processed_pseudogene
ENSG00000230587 (AC093609.1)
 ENST00000434020 (AC093609.1-001) 43097746-43102691 lincRNA
ENSG00000231826 (AC016735.2)
 ENST00000422351 (AC016735.2-001) 43027853-43039543 lincRNA
ENST00000425212 (AC016735.2-003) 43033233-43039541 lincRNA
ENST00000449766 (AC016735.2-002) 43032501-43039547 lincRNA
ENSG00000232202 (AC098824.6)
 ENST00000453565 (AC098824.6-001) 42826322-42827617 processed_pseudogene
ENSG00000233978 (AC016735.3)
 ENST00000438736 (AC016735.3-001) 43041193-43043782 lincRNA

Homo sapiens Ensembl (GRCh38)

Genome
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Structures from Ensembl
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Transcripts
Structures from Ensembl
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CIL_0001XL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000000673-ENSMUSG00000045817 CGP 10090 17:83831356-84187947
GeneTranscriptPositionBiotype
ENSMUSG00000000673 (Haao)
3-hydroxyanthranilate 3,4-dioxygenase 		ENSMUST00000000687 (Haao-201) 83831356-83846790 protein_coding
ENSMUSG00000045817 (Zfp36l2)
zinc finger protein 36, C3H type-like 2 		ENSMUST00000060366 (Zfp36l2-001) 84183931-84187947 protein_coding
ENSMUSG00000088193 (Gm23905)
predicted gene, 23905 		ENSMUST00000157568 (Gm23905-201) 83947588-83947696 rRNA
ENSMUSG00000097254 (C430042M11Rik)
RIKEN cDNA C430042M11 gene 		ENSMUST00000180515 (C430042M11Rik-201) 83851675-83854393 lincRNA

Mus musculus Ensembl (GRCm38)

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Genes
Structures from Ensembl
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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001XL_0001ENSG00000152518ENST00000282388ENST00000620081ENSG00000162882ENST00000294973ENST00000402268ENST00000402698ENST00000404451ENST00000406007ENST00000406924ENST00000431905ENSG00000207087ENST00000384359ENSG00000224739ENST00000457457ENSG00000226491ENST00000419363ENSG00000230587ENST00000434020ENSG00000231826ENST00000422351ENST00000425212ENST00000449766ENSG00000232202ENST00000453565ENSG00000233978ENST00000438736CIL_0001XL_0002ENSMUSG00000000673ENSMUST00000000687ENSMUSG00000045817ENSMUST00000060366ENSMUSG00000088193ENSMUST00000157568ENSMUSG00000097254ENSMUST00000180515
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001XL_0001ENSG00000152518ENST00000282388ENSG00000162882ENST00000294973ENST00000402268ENST00000402698ENST00000404451ENST00000406007ENST00000406924ENST00000431905ENSG00000207087ENST00000384359ENSG00000224739ENST00000457457ENSG00000226491ENST00000419363ENSG00000230587ENST00000434020ENSG00000231826ENST00000422351ENST00000425212ENST00000449766ENSG00000232202ENST00000453565ENSG00000233978ENST00000438736CIL_0001XL_0002ENSMUSG00000000673ENSMUST00000000687ENSMUSG00000045817ENSMUST00000060366ENSMUSG00000088193ENSMUST00000157568ENSMUSG00000097254ENSMUST00000180515
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000152518 ENST00000282388 60.859±0.00 18.871±0.00 8.221±0.00 8.922±6.08 38.138±21.07 56.201±49.54 14.006±13.50 36.264±30.02 19.898±11.12 130.289±111.34 24.755±22.58 72.135±31.10 15.929±1.96 34.576±21.63
ENST00000620081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000162882 ENST00000294973 1.494±0.00 3.794±0.00 1.366±0.00 0.599±0.00 5.270±0.00 0.939±0.13 1.340±0.00 16.716±8.00 52.171±0.00 6.222±0.00 0.743±0.00 6.705±4.64 9.112±4.19 2.328±1.36
ENST00000402268 N/A N/A 3.028±0.00 0.179±0.03 0.170±0.00 N/A N/A 4.125±0.00 1.061±0.00 N/A N/A 0.310±0.00 N/A 0.180±0.00
ENST00000402698 N/A 0.697±0.00 N/A 0.138±0.00 N/A 1.286±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000404451 N/A N/A N/A N/A N/A 0.403±0.00 N/A N/A N/A N/A N/A 1.734±0.00 N/A N/A
ENST00000406007 0.505±0.00 N/A N/A 0.415±0.00 N/A N/A N/A N/A 1.096±0.00 0.766±0.00 0.569±0.00 N/A 3.557±0.00 0.634±0.00
ENST00000406924 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.375±0.00 N/A 0.278±0.00
ENST00000431905 N/A N/A N/A 0.163±0.00 N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A N/A N/A
ENSG00000207087 ENST00000384359 0.191±0.00 N/A N/A N/A N/A N/A 1.260±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000224739 ENST00000457457 N/A 0.127±0.00 N/A 0.212±0.00 N/A N/A N/A 0.286±0.00 1.146±0.00 N/A N/A 0.412±0.00 0.348±0.00 0.067±0.00
ENSG00000226491 ENST00000419363 0.264±0.00 0.351±0.00 0.829±0.00 0.184±0.00 0.323±0.00 0.495±0.11 0.213±0.18 1.244±0.42 0.663±0.00 0.357±0.00 N/A 0.501±0.20 0.164±0.00 0.358±0.22
ENSG00000230587 ENST00000434020 0.209±0.00 0.595±0.00 N/A 0.054±0.00 0.149±0.02 0.297±0.00 0.589±0.00 0.412±0.00 0.740±0.62 0.591±0.23 0.189±0.10 0.142±0.02 0.069±0.00 0.384±0.09
ENSG00000231826 ENST00000422351 0.056±0.00 0.147±0.00 N/A 0.614±0.00 0.420±0.30 0.149±0.00 0.031±0.02 0.076±0.00 0.016±0.00 0.026±0.00 0.008±0.00 0.104±0.07 0.548±0.21 0.245±0.01
ENST00000425212 N/A N/A N/A N/A N/A N/A 0.024±0.00 0.599±0.00 N/A 0.026±0.00 N/A N/A 0.387±0.00 0.104±0.00
ENST00000449766 N/A N/A N/A 0.204±0.09 N/A N/A N/A 0.265±0.00 N/A N/A N/A 0.308±0.17 0.519±0.00 0.090±0.00
ENSG00000232202 ENST00000453565 0.011±0.00 0.142±0.00 N/A 0.042±0.00 0.052±0.00 N/A 0.010±0.00 N/A 0.557±0.00 N/A 0.086±0.00 0.135±0.12 N/A 0.491±0.14
ENSG00000233978 ENST00000438736 N/A 0.039±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.097±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000000673 ENSMUST00000000687 0.330±0.17 0.510±0.23 0.134±0.00 0.103±0.08 6.068±2.78 0.620±0.48 0.256±0.08 79.440±3.18 191.771±164.23 1.501±0.24 0.271±0.38 0.568±0.25 7.371±9.89 0.093±0.04
ENSMUSG00000045817 ENSMUST00000060366 43.226±17.74 56.662±11.11 40.335±0.47 8.665±3.07 81.233±43.67 107.727±9.54 8.890±2.32 21.652±3.83 17.418±10.22 66.135±15.36 3.979±0.52 77.101±29.93 21.026±3.23 2.727±1.06
ENSMUSG00000088193 ENSMUST00000157568 N/A N/A N/A N/A 1970.670±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097254 ENSMUST00000180515 0.418±0.15 0.095±0.06 0.943±0.42 0.318±0.40 0.329±0.13 0.737±0.34 0.042±0.04 0.270±0.05 0.390±0.27 0.181±0.06 0.033±0.01 0.171±0.06 0.391±0.36 0.469±0.25

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