C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calumenin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031779 Calu-001 ENSMUSG00000029767 10090 + 6:29348106-29376675 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031779
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031779 43.070±16.41 5.141±1.49 88.158±7.22 25.219±14.66 21.941±12.06 11.010±2.13 33.083±3.98 14.071±1.98 25.390±17.60 35.972±11.25 9.168±3.08 32.553±13.51 89.362±41.88 4.867±0.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004FD CIL_0004FD_0002 CGP 6:29319140-29377110
CIL_0005UE CIL_0005UE_0003 CGP 6:29348069-29388468

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IDA calcium ion binding
GO:0005515 IEA protein binding
GO:0005576 TAS extracellular region
GO:0005783 IDA endoplasmic reticulum
GO:0005788 TAS endoplasmic reticulum lumen
GO:0016020 IEA membrane
GO:0016529 IEA sarcoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000249364 CALU-001 protein_coding Homo_sapiens 0 1986
ENST00000449187 CALU-002 protein_coding Homo_sapiens 0 1640
ENST00000479257 CALU-003 protein_coding Homo_sapiens 0 1947
ENST00000493278 CALU-004 protein_coding Homo_sapiens 0 652
ENST00000535011 CALU-006 protein_coding Homo_sapiens 0 1016
ENST00000542996 CALU-005 protein_coding Homo_sapiens 0 1637

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