C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001YX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000089456-ENSDARG00000001234 CGP 7955 7:18795620-18859354
GeneTranscriptPositionBiotype
ENSDARG00000001234 (map4k2l)
mitogen-activated protein kinase kinase kinase kinase 2-like
ENSDART00000009367 (map4k2l-001) 18817302-18859354 protein_coding
ENSDARG00000089456 (men1)
multiple endocrine neoplasia type 1
ENSDART00000124268 (men1-202) 18799307-18815854 protein_coding
ENSDART00000149047 (men1-001) 18795620-18816435 protein_coding
ENSDART00000149223 (men1-002) 18799655-18813059 retained_intron

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0001YX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024947-ENSMUSG00000024948 CGP 10090 19:6334979-6355615
GeneTranscriptPositionBiotype
ENSMUSG00000024947 (Men1)
multiple endocrine neoplasia 1
ENSMUST00000056391 (Men1-003) 6335039-6340889 protein_coding
ENSMUST00000078137 (Men1-004) 6335111-6340889 protein_coding
ENSMUST00000079327 (Men1-002) 6335013-6340889 protein_coding
ENSMUST00000113500 (Men1-007) 6335047-6340783 protein_coding
ENSMUST00000113501 (Men1-005) 6335039-6340889 protein_coding
ENSMUST00000113502 (Men1-201) 6334979-6340880 protein_coding
ENSMUST00000113503 (Men1-008) 6335461-6340172 protein_coding
ENSMUST00000113504 (Men1-001) 6334979-6340891 protein_coding
ENSMUST00000156154 (Men1-006) 6335046-6340891 retained_intron
ENSMUST00000166909 (Men1-009) 6335064-6340463 protein_coding
ENSMUST00000170132 (Men1-011) 6336910-6338408 protein_coding
ENSMUST00000170292 (Men1-010) 6339847-6340812 nonsense_mediated_decay
ENSMUSG00000024948 (Map4k2)
mitogen-activated protein kinase kinase kinase kinase 2
ENSMUST00000025897 (Map4k2-001) 6341160-6355615 protein_coding
ENSMUST00000123468 (Map4k2-009) 6341471-6343521 retained_intron
ENSMUST00000124333 (Map4k2-020) 6341270-6343523 retained_intron
ENSMUST00000124556 (Map4k2-002) 6341208-6355301 nonsense_mediated_decay
ENSMUST00000126841 (Map4k2-014) 6345350-6346293 retained_intron
ENSMUST00000127809 (Map4k2-021) 6341418-6343858 processed_transcript
ENSMUST00000128170 (Map4k2-022) 6346692-6353838 nonsense_mediated_decay
ENSMUST00000130382 (Map4k2-018) 6341224-6345742 protein_coding
ENSMUST00000133696 (Map4k2-003) 6341135-6355612 retained_intron
ENSMUST00000134307 (Map4k2-012) 6342537-6342845 retained_intron
ENSMUST00000137095 (Map4k2-005) 6346549-6353840 retained_intron
ENSMUST00000140098 (Map4k2-016) 6350909-6351580 retained_intron
ENSMUST00000142496 (Map4k2-019) 6341250-6353527 nonsense_mediated_decay
ENSMUST00000142862 (Map4k2-017) 6352775-6353633 processed_transcript
ENSMUST00000148410 (Map4k2-011) 6341216-6342874 retained_intron
ENSMUST00000149624 (Map4k2-010) 6341191-6341996 processed_transcript
ENSMUST00000152259 (Map4k2-004) 6341779-6351887 retained_intron
ENSMUST00000152349 (Map4k2-007) 6341155-6342656 nonsense_mediated_decay
ENSMUST00000152912 (Map4k2-013) 6343516-6344647 retained_intron
ENSMUST00000154900 (Map4k2-015) 6346669-6351659 processed_transcript
ENSMUST00000155569 (Map4k2-008) 6341449-6343521 processed_transcript
ENSMUST00000155655 (Map4k2-006) 6352620-6355442 processed_transcript

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001YX_0001ENSDARG00000001234ENSDART00000009367ENSDARG00000089456ENSDART00000124268ENSDART00000149047ENSDART00000149223CIL_0001YX_0002ENSMUSG00000024947ENSMUST00000056391ENSMUST00000078137ENSMUST00000079327ENSMUST00000113500ENSMUST00000113501ENSMUST00000113502ENSMUST00000113503ENSMUST00000113504ENSMUST00000156154ENSMUST00000166909ENSMUST00000170132ENSMUST00000170292ENSMUSG00000024948ENSMUST00000025897ENSMUST00000123468ENSMUST00000124333ENSMUST00000124556ENSMUST00000126841ENSMUST00000127809ENSMUST00000128170ENSMUST00000130382ENSMUST00000133696ENSMUST00000134307ENSMUST00000137095ENSMUST00000140098ENSMUST00000142496ENSMUST00000142862ENSMUST00000148410ENSMUST00000149624ENSMUST00000152259ENSMUST00000152349ENSMUST00000152912ENSMUST00000154900ENSMUST00000155569ENSMUST00000155655
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001YX_0001ENSDARG00000001234ENSDART00000009367ENSDARG00000089456ENSDART00000124268ENSDART00000149047ENSDART00000149223CIL_0001YX_0002ENSMUSG00000024947ENSMUST00000056391ENSMUST00000078137ENSMUST00000079327ENSMUST00000113500ENSMUST00000113501ENSMUST00000113502ENSMUST00000113504ENSMUST00000156154ENSMUST00000170132ENSMUSG00000024948ENSMUST00000025897ENSMUST00000124556ENSMUST00000142496ENSMUST00000155655
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000001234 ENSDART00000009367 N/A N/A N/A 0.654±0.35 N/A N/A 0.451±0.14 0.426±0.13 0.154±0.00 N/A 0.434±0.00 N/A N/A N/A
ENSDARG00000089456 ENSDART00000124268 N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000149047 N/A N/A N/A 0.063±0.01 N/A N/A 0.044±0.02 0.317±0.20 N/A N/A N/A N/A N/A N/A
ENSDART00000149223 N/A N/A N/A 0.092±0.00 N/A N/A 1.371±0.00 0.125±0.00 N/A N/A 0.080±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024947 ENSMUST00000056391 2.650±0.76 3.177±0.25 2.114±0.52 8.097±1.57 N/A 2.397±0.26 0.849±0.00 2.425±0.23 2.168±0.98 2.478±0.00 0.924±0.62 4.476±0.43 5.886±1.58 1.496±0.01
ENSMUST00000078137 N/A N/A N/A 7.307±0.00 N/A N/A N/A N/A N/A N/A 0.512±0.00 3.857±1.42 8.504±0.60 0.638±0.00
ENSMUST00000079327 9.495±2.07 8.474±2.24 7.410±1.17 32.079±10.12 9.188±1.39 7.195±1.08 3.002±1.28 10.277±0.94 6.296±1.54 9.503±1.50 0.960±0.58 17.844±5.05 8.680±3.40 5.348±0.76
ENSMUST00000113500 N/A N/A N/A 11.338±0.00 N/A N/A N/A N/A N/A N/A 0.289±0.00 6.653±5.12 8.991±1.25 1.255±0.00
ENSMUST00000113501 N/A N/A N/A N/A 2.519±0.00 N/A N/A N/A N/A N/A N/A 5.828±2.87 N/A N/A
ENSMUST00000113502 5.340±0.67 11.952±0.63 3.172±0.03 5.152±0.44 8.393±2.09 8.562±1.74 1.746±0.44 10.930±0.88 3.234±1.03 6.673±1.84 1.003±0.53 7.475±1.77 5.302±1.78 4.259±0.96
ENSMUST00000113503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000113504 N/A 10.112±1.24 3.162±0.00 N/A N/A N/A N/A 6.530±1.82 1.560±0.00 N/A 1.578±0.00 N/A 4.482±0.00 N/A
ENSMUST00000156154 3.248±0.69 4.720±0.54 2.197±0.31 4.113±1.29 4.373±1.69 3.704±0.51 1.581±0.24 3.327±0.54 1.912±0.57 4.745±0.26 0.313±0.08 8.481±2.99 N/A 1.704±0.02
ENSMUST00000166909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.010±0.00 N/A
ENSMUST00000170292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000024948 ENSMUST00000025897 11.562±2.09 21.380±0.32 16.907±2.19 14.243±4.38 37.001±13.23 11.788±1.20 9.768±2.78 11.516±4.08 7.394±2.78 54.443±11.00 3.838±0.89 22.220±5.53 N/A N/A
ENSMUST00000123468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124556 10.995±0.87 22.605±3.29 N/A N/A 19.326±5.29 N/A 8.736±0.85 9.472±1.77 3.939±0.03 32.791±3.23 N/A N/A N/A N/A
ENSMUST00000126841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127809 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133696 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137095 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142496 N/A N/A N/A N/A 29.954±5.67 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149624 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154900 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155655 N/A N/A N/A N/A 13.866±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading