C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00025J_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000128052-ENSG00000128039 CGP 9606 4:55078477-55373096
GeneTranscriptPositionBiotype
ENSG00000128039 (SRD5A3)
steroid 5 alpha-reductase 3 		ENST00000264228 (SRD5A3-001) 55346109-55373096 protein_coding
ENST00000505210 (SRD5A3-002) 55346412-55370310 protein_coding
ENST00000514398 (SRD5A3-003) 55359000-55369975 processed_transcript
ENSG00000128052 (KDR)
kinase insert domain receptor (a type III receptor tyrosine kinase) 		ENST00000263923 (KDR-001) 55078477-55125589 protein_coding
ENST00000509309 (KDR-003) 55094850-55096720 retained_intron
ENST00000512566 (KDR-002) 55104593-55125293 retained_intron
ENSG00000239545 (RN7SL822P)
RNA, 7SL, cytoplasmic 822, pseudogene 		ENST00000475674 (RN7SL822P-201) 55215624-55215919 misc_RNA
ENSG00000249700 (SRD5A3-AS1)
SRD5A3 antisense RNA 1 		ENST00000433175 (SRD5A3-AS1-001) 55363971-55383396 antisense
ENST00000510637 (SRD5A3-AS1-002) 55366601-55385580 antisense
ENST00000591915 (SRD5A3-AS1-003) 55377607-55387443 antisense
ENST00000592823 (SRD5A3-AS1-004) 55374875-55395842 antisense
ENST00000595103 (SRD5A3-AS1-009) 55366954-55385625 antisense
ENST00000595734 (SRD5A3-AS1-008) 55366954-55385666 antisense
ENST00000596289 (SRD5A3-AS1-010) 55366954-55385300 antisense
ENST00000596312 (SRD5A3-AS1-012) 55366954-55381893 antisense
ENST00000598819 (SRD5A3-AS1-007) 55387321-55395830 antisense
ENST00000598906 (SRD5A3-AS1-011) 55366954-55383882 antisense
ENST00000599135 (SRD5A3-AS1-005) 55377607-55395842 antisense
ENST00000601433 (SRD5A3-AS1-006) 55382538-55395837 antisense
ENST00000608086 (SRD5A3-AS1-016) 55367010-55375972 antisense
ENST00000608136 (SRD5A3-AS1-013) 55386778-55395847 retained_intron
ENST00000608265 (SRD5A3-AS1-017) 55367010-55385608 antisense
ENST00000608558 (SRD5A3-AS1-018) 55367010-55383805 antisense
ENST00000609051 (SRD5A3-AS1-019) 55367010-55385608 antisense
ENST00000609487 (SRD5A3-AS1-022) 55367010-55385615 antisense
ENST00000609500 (SRD5A3-AS1-015) 55367010-55380892 antisense
ENST00000609573 (SRD5A3-AS1-020) 55367017-55385585 antisense
ENST00000609580 (SRD5A3-AS1-014) 55367010-55386406 antisense
ENST00000609700 (SRD5A3-AS1-021) 55367012-55383450 antisense
ENST00000610396 (SRD5A3-AS1-024) 55366954-55386687 retained_intron
ENST00000613794 (SRD5A3-AS1-026) 55367010-55382663 antisense
ENST00000619203 (SRD5A3-AS1-025) 55374924-55386892 retained_intron
ENST00000619685 (SRD5A3-AS1-027) 55367010-55375188 retained_intron
ENST00000619912 (SRD5A3-AS1-023) 55366954-55382642 antisense
ENSG00000250646 (RP11-530I17.1)
 ENST00000511222 (RP11-530I17.1-001) 55053060-55092534 antisense
ENSG00000251111 (FCF1P8)
FCF1 pseudogene 8 		ENST00000510322 (FCF1P8-001) 55351812-55352408 processed_pseudogene
CIL_00025J_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062960-ENSMUSG00000029233 CGP 10090 5:75932827-76155504
GeneTranscriptPositionBiotype
ENSMUSG00000029233 (Srd5a3)
steroid 5 alpha-reductase 3 		ENSMUST00000031143 (Srd5a3-001) 76140271-76155479 protein_coding
ENSMUST00000113506 (Srd5a3-005) 76147961-76155246 protein_coding
ENSMUST00000113507 (Srd5a3-004) 76146637-76155244 protein_coding
ENSMUST00000124217 (Srd5a3-007) 76152769-76155504 retained_intron
ENSMUST00000127278 (Srd5a3-008) 76140730-76149947 protein_coding
ENSMUST00000138699 (Srd5a3-006) 76140271-76151515 retained_intron
ENSMUST00000149222 (Srd5a3-002) 76140306-76140862 processed_transcript
ENSMUST00000152642 (Srd5a3-003) 76140700-76149755 protein_coding
ENSMUSG00000062960 (Kdr)
kinase insert domain protein receptor 		ENSMUST00000113516 (Kdr-001) 75932827-75978458 protein_coding
ENSMUST00000149573 (Kdr-002) 75961244-75978458 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00025J_0001ENSG00000128039ENST00000264228ENST00000505210ENSG00000128052ENST00000263923ENST00000512566ENSG00000239545ENST00000475674ENSG00000249700ENST00000433175ENST00000510637ENST00000591915ENST00000608136ENST00000619685ENST00000619912ENSG00000250646ENST00000511222ENSG00000251111ENST00000510322CIL_00025J_0002ENSMUSG00000029233ENSMUST00000031143ENSMUST00000113506ENSMUST00000113507ENSMUST00000124217ENSMUST00000138699ENSMUST00000149222ENSMUSG00000062960ENSMUST00000113516ENSMUST00000149573
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000128039 ENST00000264228 2.315±0.00 0.781±0.00 0.310±0.00 1.520±0.24 1.375±0.00 0.385±0.24 0.526±0.39 0.621±0.46 0.435±0.21 0.524±0.00 0.857±0.00 0.996±0.29 1.585±0.15 1.849±0.00
ENST00000505210 13.847±0.00 5.416±0.00 0.963±0.00 4.555±0.12 3.945±2.87 5.640±0.00 1.923±1.35 3.493±1.99 2.797±2.09 5.445±0.00 2.898±2.10 3.098±0.85 7.449±1.40 8.366±0.00
ENST00000514398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000128052 ENST00000263923 11.323±0.00 9.934±0.00 2.753±0.00 1.054±0.89 6.022±3.27 5.527±3.52 5.579±3.20 8.228±1.58 4.929±0.99 11.062±2.76 1.141±0.77 2.975±0.89 38.066±5.52 3.172±2.35
ENST00000509309 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512566 N/A N/A 2.805±0.00 N/A 3.589±0.00 N/A 1.140±0.00 2.709±0.00 1.709±0.00 4.595±0.00 N/A 1.317±0.00 N/A N/A
ENSG00000239545 ENST00000475674 N/A 0.245±0.00 N/A 0.203±0.00 0.192±0.00 N/A 0.058±0.00 0.189±0.00 N/A N/A 0.166±0.00 N/A N/A 0.228±0.00
ENSG00000249700 ENST00000433175 N/A 1.564±0.00 N/A N/A 1.635±0.00 N/A N/A N/A N/A 0.861±0.00 N/A 0.618±0.00 N/A 2.175±0.00
ENST00000510637 N/A N/A N/A N/A N/A N/A N/A N/A 0.169±0.00 N/A N/A N/A N/A N/A
ENST00000591915 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.563±0.00 N/A N/A N/A
ENST00000592823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000596312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598906 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608136 N/A N/A N/A 2.973±0.00 N/A 0.541±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000609700 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000610396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619685 N/A N/A N/A N/A N/A N/A N/A 0.736±0.00 N/A 1.481±0.00 N/A N/A N/A N/A
ENST00000619912 N/A N/A 0.374±0.00 N/A N/A N/A 0.264±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000250646 ENST00000511222 N/A 0.139±0.00 N/A N/A N/A N/A N/A N/A 0.414±0.00 0.684±0.00 0.139±0.00 N/A 0.121±0.00 N/A
ENSG00000251111 ENST00000510322 0.036±0.00 N/A N/A 0.090±0.00 0.035±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029233 ENSMUST00000031143 22.910±5.45 23.500±4.07 9.956±0.27 2.591±1.51 18.749±3.21 16.562±2.15 4.619±0.78 10.807±3.02 6.750±1.48 23.117±2.12 0.819±0.30 21.730±11.34 11.288±10.08 1.900±0.51
ENSMUST00000113506 N/A N/A N/A N/A 25.920±0.00 N/A N/A N/A 2.234±0.00 N/A 0.689±0.00 8.680±0.56 9.590±2.46 N/A
ENSMUST00000113507 9.151±1.92 N/A 3.939±0.00 1.251±0.29 6.609±0.00 N/A 3.887±0.87 6.876±1.85 3.245±0.90 N/A 0.898±0.28 3.122±0.86 6.594±0.00 1.164±0.83
ENSMUST00000124217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.207±0.00 2.153±0.00 0.663±0.00 N/A
ENSMUST00000127278 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138699 N/A N/A N/A 0.233±0.00 N/A N/A N/A N/A N/A N/A 0.175±0.00 0.449±0.00 N/A 0.035±0.00
ENSMUST00000149222 69.618±4.93 232.779±70.73 N/A N/A 66.323±18.59 47.677±6.46 N/A 21.409±0.63 12.610±1.96 51.696±10.66 N/A 68.417±24.87 N/A N/A
ENSMUST00000152642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000062960 ENSMUST00000113516 23.996±2.94 16.341±3.39 5.671±0.11 6.131±2.65 15.108±2.49 3.452±0.74 22.662±2.22 17.049±0.42 4.143±0.89 63.705±3.77 6.266±1.82 11.081±1.70 9.610±3.55 0.618±0.16
ENSMUST00000149573 N/A 4.974±0.78 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading