C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_00025K_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000134852-ENSG00000163440 | CGP | 9606 | 4:55427903-55592212  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000134851  (TMEM165)transmembrane protein 165 |
ENST00000381334 (TMEM165-001)
|
55395957-55426172 | protein_coding | |
|
ENST00000502797 (TMEM165-008)
|
55403243-55412156 | retained_intron | ||
|
ENST00000506103 (TMEM165-012)
|
55417919-55452458 | nonsense_mediated_decay | ||
|
ENST00000506198 (TMEM165-006)
|
55395957-55425657 | protein_coding | ||
|
ENST00000508404 (TMEM165-002)
|
55395963-55425804 | nonsense_mediated_decay | ||
|
ENST00000508561 (TMEM165-009)
|
55416923-55425537 | processed_transcript | ||
|
ENST00000509575 (TMEM165-010)
|
55417691-55424812 | retained_intron | ||
|
ENST00000511710 (TMEM165-007)
|
55398923-55417245 | processed_transcript | ||
|
ENST00000514070 (TMEM165-005)
|
55396251-55397405 | processed_transcript | ||
|
ENST00000514904 (TMEM165-003)
|
55415271-55425545 | processed_transcript | ||
|
ENST00000515591 (TMEM165-004)
|
55423114-55425631 | retained_intron | ||
|
ENST00000608091 (TMEM165-013)
|
55417129-55453397 | protein_coding | ||
|
ENSG00000134852 (CLOCK) clock circadian regulator |
ENST00000309964 (CLOCK-005)
|
55427903-55510027 | protein_coding | |
|
ENST00000381322 (CLOCK-002)
|
55434823-55545932 | protein_coding | ||
|
ENST00000435527 (CLOCK-010)
|
55463698-55546546 | protein_coding | ||
|
ENST00000479384 (CLOCK-004)
|
55442278-55443755 | retained_intron | ||
|
ENST00000506747 (CLOCK-007)
|
55453760-55510066 | retained_intron | ||
|
ENST00000506923 (CLOCK-011)
|
55478847-55546881 | processed_transcript | ||
|
ENST00000508049 (CLOCK-012)
|
55470744-55479060 | retained_intron | ||
|
ENST00000509151 (CLOCK-009)
|
55482773-55546655 | processed_transcript | ||
|
ENST00000511124 (CLOCK-006)
|
55432476-55449426 | retained_intron | ||
|
ENST00000513033 (CLOCK-008)
|
55486394-55546646 | processed_transcript | ||
|
ENST00000513440 (CLOCK-001)
|
55435022-55547138 | protein_coding | ||
|
ENSG00000163440 (PDCL2) phosducin-like 2 |
ENST00000295645 (PDCL2-001)
|
55556525-55592212 | protein_coding | |
|
ENST00000615028 (PDCL2-201)
|
55556528-55592212 | protein_coding | ||
|
ENSG00000223305 (RN7SKP30) RNA, 7SK small nuclear pseudogene 30 |
ENST00000411373 (RN7SKP30-201)
|
55540502-55540835 | misc_RNA | |
| CIL_00025K_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000029238-ENSMUSG00000029235 | CGP | 10090 | 5:76212177-76331156 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000029235 (Pdcl2) phosducin-like 2 |
ENSMUST00000031145 (Pdcl2-001)
|
76312127-76331156 | protein_coding | |
|
ENSMUST00000122213 (Pdcl2-002)
|
76312115-76331133 | protein_coding | ||
|
ENSMUSG00000029238 (Clock) circadian locomotor output cycles kaput |
ENSMUST00000075159 (Clock-201)
|
76212177-76304548 | protein_coding | |
|
ENSMUSG00000098449 (Gm7467) predicted gene 7467 |
ENSMUST00000185173 (Gm7467-001)
|
76304876-76305527 | antisense | |
Expression Patterns
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