C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00025R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000089428-ENSDARG00000091408 CGP 7955 2:54979658-55094860
GeneTranscriptPositionBiotype
ENSDARG00000089428 (rab12)
RAB12, member RAS oncogene family 		ENSDART00000127124 (rab12-201) 54979658-55010979 protein_coding
ENSDARG00000091408 (MTCL1 (2 of 2))
microtubule crosslinking factor 1 		ENSDART00000130977 (MTCL1 (2 of 2)-201) 55022580-55094860 protein_coding
CIL_00025R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000206418-ENSG00000168502 CGP 9606 18:8609445-8832778
GeneTranscriptPositionBiotype
ENSG00000168502 (MTCL1)
microtubule crosslinking factor 1 		ENST00000306329 (MTCL1-015) 8705661-8828946 protein_coding
ENST00000359865 (MTCL1-001) 8717371-8832778 protein_coding
ENST00000400050 (MTCL1-201) 8717898-8832777 protein_coding
ENST00000517554 (MTCL1-005) 8784658-8787303 retained_intron
ENST00000517570 (MTCL1-003) 8707411-8832777 protein_coding
ENST00000518226 (MTCL1-012) 8809818-8813157 processed_transcript
ENST00000518815 (MTCL1-006) 8789674-8832778 protein_coding
ENST00000519823 (MTCL1-017) 8811131-8819245 processed_transcript
ENST00000520495 (MTCL1-004) 8782088-8810002 nonsense_mediated_decay
ENST00000520926 (MTCL1-013) 8812845-8819171 retained_intron
ENST00000521018 (MTCL1-010) 8784674-8787344 processed_transcript
ENST00000522146 (MTCL1-008) 8717376-8777977 retained_intron
ENST00000522592 (MTCL1-011) 8800442-8813044 processed_transcript
ENST00000523122 (MTCL1-007) 8717759-8718592 protein_coding
ENST00000523811 (MTCL1-009) 8784541-8785860 processed_transcript
ENST00000581670 (MTCL1-016) 8829923-8832778 processed_transcript
ENSG00000206418 (RAB12)
RAB12, member RAS oncogene family 		ENST00000329286 (RAB12-001) 8609445-8639381 protein_coding
ENST00000580987 (RAB12-002) 8632859-8635567 retained_intron
ENSG00000263935 (TOMM20P3)
translocase of outer mitochondrial membrane 20 homolog (yeast) pseudogene 3 		ENST00000579772 (TOMM20P3-001) 8688022-8688410 processed_pseudogene
ENSG00000266708 (RP11-661O13.1)
 ENST00000580267 (RP11-661O13.1-001) 8635179-8636347 antisense
ENSG00000272788 (RP11-674N23.4)
 ENST00000609424 (RP11-674N23.4-001) 8801656-8802305 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00025R_0001ENSDARG00000089428ENSDART00000127124ENSDARG00000091408ENSDART00000130977CIL_00025R_0002ENSG00000168502ENST00000306329ENST00000359865ENST00000400050ENST00000517554ENST00000517570ENST00000518226ENST00000518815ENST00000519823ENST00000520495ENST00000520926ENST00000521018ENST00000522146ENST00000522592ENST00000523122ENST00000523811ENST00000581670ENSG00000206418ENST00000329286ENST00000580987ENSG00000263935ENST00000579772ENSG00000266708ENST00000580267ENSG00000272788ENST00000609424
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00025R_0001ENSDARG00000089428ENSDART00000127124ENSDARG00000091408ENSDART00000130977CIL_00025R_0002ENSG00000168502ENST00000306329ENST00000400050ENST00000517554ENST00000517570ENST00000518815ENST00000520926ENST00000521018ENST00000522146ENST00000581670ENSG00000206418ENST00000329286ENST00000580987ENSG00000263935ENST00000579772ENSG00000266708ENST00000580267ENSG00000272788ENST00000609424
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000089428 ENSDART00000127124 N/A N/A N/A 0.121±0.02 N/A N/A 3.072±1.88 3.452±1.80 0.576±0.00 N/A 2.110±0.00 N/A N/A N/A
ENSDARG00000091408 ENSDART00000130977 N/A N/A N/A 8.462±3.32 N/A N/A 0.142±0.00 0.487±0.00 0.088±0.00 N/A 0.483±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000168502 ENST00000306329 0.309±0.00 0.090±0.00 N/A 0.615±0.00 0.273±0.19 N/A 0.110±0.00 0.410±0.00 0.871±0.00 0.264±0.00 0.121±0.00 2.345±1.75 0.529±0.27 2.877±0.00
ENST00000359865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000400050 0.127±0.00 N/A N/A 1.394±0.00 0.206±0.00 0.864±0.00 N/A N/A 0.947±0.00 0.030±0.00 0.188±0.00 N/A N/A N/A
ENST00000517554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.176±0.00 N/A N/A N/A
ENST00000517570 N/A N/A N/A 3.080±0.00 0.084±0.00 2.709±0.00 N/A N/A 0.170±0.00 N/A N/A 0.572±0.13 0.699±0.41 N/A
ENST00000518226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518815 0.221±0.00 N/A N/A N/A N/A N/A N/A 0.596±0.00 N/A 0.048±0.00 N/A 1.601±1.13 0.427±0.00 2.246±0.03
ENST00000519823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.237±0.00 7.308±0.00
ENST00000521018 N/A N/A N/A N/A N/A N/A N/A 0.863±0.00 N/A N/A N/A N/A N/A N/A
ENST00000522146 N/A N/A N/A 13.298±0.00 3.948±0.00 5.155±0.00 0.522±0.00 0.832±0.00 N/A 0.354±0.00 1.404±0.00 10.096±0.00 2.096±0.00 N/A
ENST00000522592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581670 N/A N/A N/A 1.384±0.00 N/A 1.279±0.00 0.079±0.00 0.333±0.00 0.143±0.00 N/A N/A 1.960±2.22 N/A N/A
ENSG00000206418 ENST00000329286 11.483±0.00 12.687±0.00 2.482±0.00 11.497±0.37 9.169±5.70 9.758±8.82 17.999±12.09 10.339±4.02 9.612±1.41 14.800±10.79 38.161±24.80 14.648±6.07 18.555±5.57 11.141±0.23
ENST00000580987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.435±0.00
ENSG00000263935 ENST00000579772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.217±0.00
ENSG00000266708 ENST00000580267 7.329±0.00 7.782±0.00 N/A 7.932±0.00 7.364±0.00 7.219±0.00 11.110±0.00 N/A N/A N/A 22.413±0.00 14.087±0.00 10.162±0.00 5.361±1.00
ENSG00000272788 ENST00000609424 N/A N/A N/A 0.022±0.00 0.631±0.00 0.245±0.00 N/A N/A 0.212±0.00 N/A N/A 0.058±0.00 0.152±0.02 0.324±0.06

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