C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00025W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000146909-ENSG00000130675 CGP 9606 7:156949723-157010651
GeneTranscriptPositionBiotype
ENSG00000130675 (MNX1)
motor neuron and pancreas homeobox 1 		ENST00000252971 (MNX1-001) 157004853-157010651 protein_coding
ENST00000425745 (MNX1-005) 157005842-157009287 protein_coding
ENST00000428439 (MNX1-004) 157005842-157009435 protein_coding
ENST00000469500 (MNX1-006) 156994051-157009075 protein_coding
ENST00000474448 (MNX1-007) 157005842-157009435 nonsense_mediated_decay
ENST00000479817 (MNX1-003) 156994051-157009697 protein_coding
ENST00000543409 (MNX1-201) 157004853-157009435 protein_coding
ENST00000605400 (MNX1-008) 157007539-157009291 retained_intron
ENSG00000146909 (NOM1)
nucleolar protein with MIF4G domain 1 		ENST00000275820 (NOM1-001) 156949723-156973182 protein_coding
ENST00000460332 (NOM1-002) 156954112-156960118 processed_transcript
ENST00000469271 (NOM1-003) 156962171-156964125 retained_intron
ENST00000472491 (NOM1-006) 156962168-156964235 retained_intron
ENST00000475176 (NOM1-004) 156959996-156963352 retained_intron
ENST00000485661 (NOM1-007) 156966159-156969196 retained_intron
ENST00000486131 (NOM1-008) 156968755-156970083 retained_intron
ENST00000489850 (NOM1-005) 156962171-156963475 retained_intron
ENSG00000235029 (MNX1-AS2)
MNX1 antisense RNA 2 		ENST00000429228 (MNX1-AS2-001) 157006307-157007132 antisense
CIL_00025W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000001569-ENSMUSG00000001566 CGP 10090 5:29434664-29478470
GeneTranscriptPositionBiotype
ENSMUSG00000001566 (Mnx1)
motor neuron and pancreas homeobox 1 		ENSMUST00000001608 (Mnx1-201) 29473261-29478470 protein_coding
ENSMUST00000165512 (Mnx1-001) 29473034-29478470 protein_coding
ENSMUSG00000001569 (Nom1)
nucleolar protein with MIF4G domain 1 		ENSMUST00000001611 (Nom1-001) 29434664-29453506 protein_coding
ENSMUST00000146347 (Nom1-002) 29441318-29446355 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00025W_0001ENSG00000130675ENST00000252971ENST00000425745ENST00000428439ENST00000469500ENST00000474448ENST00000479817ENST00000543409ENST00000605400ENSG00000146909ENST00000275820ENST00000460332ENST00000469271ENST00000472491ENST00000475176ENST00000485661ENST00000486131ENST00000489850ENSG00000235029ENST00000429228CIL_00025W_0002ENSMUSG00000001566ENSMUST00000001608ENSMUST00000165512ENSMUSG00000001569ENSMUST00000001611ENSMUST00000146347
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00025W_0001ENSG00000130675ENST00000252971ENST00000543409ENST00000605400ENSG00000146909ENST00000275820ENST00000475176ENST00000485661ENST00000486131ENSG00000235029ENST00000429228CIL_00025W_0002ENSMUSG00000001566ENSMUST00000001608ENSMUST00000165512ENSMUSG00000001569ENSMUST00000001611ENSMUST00000146347
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130675 ENST00000252971 N/A N/A N/A N/A 0.112±0.00 0.472±0.16 N/A 0.177±0.00 N/A N/A 0.050±0.00 3.098±2.35 0.251±0.00 0.552±0.16
ENST00000425745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000428439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479817 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543409 N/A N/A N/A N/A N/A 0.121±0.00 N/A N/A N/A N/A N/A 1.328±0.46 0.180±0.00 0.400±0.01
ENST00000605400 N/A N/A N/A N/A 0.174±0.00 0.252±0.16 N/A N/A N/A N/A N/A 0.581±0.20 N/A 0.113±0.00
ENSG00000146909 ENST00000275820 1.599±0.00 3.239±0.00 N/A 0.754±0.37 2.396±0.00 0.864±0.43 1.223±0.00 2.755±0.00 1.216±0.20 1.561±0.00 2.084±1.93 3.424±2.00 1.931±0.35 3.234±0.18
ENST00000460332 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472491 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475176 N/A N/A 1.450±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485661 N/A N/A N/A N/A N/A N/A 1.597±0.00 N/A N/A N/A 3.164±0.00 N/A N/A N/A
ENST00000486131 N/A N/A N/A N/A N/A N/A N/A 1.271±0.00 N/A N/A N/A N/A N/A N/A
ENST00000489850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000235029 ENST00000429228 N/A 0.079±0.00 N/A N/A N/A N/A N/A N/A 0.152±0.00 N/A 0.647±0.00 N/A N/A 0.225±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001566 ENSMUST00000001608 N/A N/A N/A 0.043±0.00 N/A 0.250±0.00 N/A N/A 0.005±0.00 0.012±0.00 N/A N/A 0.026±0.01 0.262±0.07
ENSMUST00000165512 N/A N/A N/A 0.015±0.00 N/A 0.867±0.27 N/A N/A N/A N/A N/A N/A 0.102±0.07 0.293±0.00
ENSMUSG00000001569 ENSMUST00000001611 2.091±0.44 4.486±2.01 3.007±0.18 2.843±1.26 2.560±1.59 2.429±1.85 1.660±0.13 2.464±0.81 2.367±0.50 3.610±1.21 2.573±0.20 4.567±2.38 6.930±4.09 3.035±2.15
ENSMUST00000146347 N/A N/A N/A N/A 5.391±0.00 N/A 2.329±0.00 N/A N/A N/A N/A 13.255±0.00 28.970±10.83 N/A

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