C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: motor neuron and pancreas homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000001608 Mnx1-201 ENSMUSG00000001566 10090 - 5:29473261-29478470 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonLiverLungPlacentaTestisENSMUST00000001608
Transcript ID Brain Colon Liver Lung Placenta Testis
ENSMUST00000001608 0.043±0.00 0.250±0.00 0.005±0.00 0.012±0.00 0.026±0.01 0.262±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PG CIL_0007PG_0002 UCNEbase 5:29276112-29620813
CIL_00025W CIL_00025W_0002 CGP 5:29434664-29478470
CIL_0005Z2 CIL_0005Z2_0002 CGP 5:29473034-29676077

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001764 IMP neuron migration
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008045 IMP motor neuron axon guidance
GO:0009791 IMP post-embryonic development
GO:0021520 IMP spinal cord motor neuron cell fate specification
GO:0021675 IMP nerve development
GO:0021904 IDA dorsal/ventral neural tube patterning
GO:0021953 IMP central nervous system neuron differentiation
GO:0030182 IMP neuron differentiation
GO:0031016 IMP pancreas development
GO:0031018 IMP endocrine pancreas development
GO:0043565 IEA sequence-specific DNA binding
GO:0048667 IMP cell morphogenesis involved in neuron differentiation
GO:0048812 IMP neuron projection morphogenesis
GO:0060539 IMP diaphragm development
GO:0060541 IMP respiratory system development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252971 MNX1-001 protein_coding Homo_sapiens 0 1303
ENST00000428439 MNX1-004 protein_coding Homo_sapiens 0 268
ENST00000474448 MNX1-007 nonsense_mediated_decay Homo_sapiens 0 268
ENST00000543409 MNX1-201 protein_coding Homo_sapiens 0 523

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