C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleolar protein with MIF4G domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000275820 NOM1-001 ENSG00000146909 9606 + 7:156949723-156973182 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000275820
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000275820 1.599±0.00 3.239±0.00 0.754±0.37 2.396±0.00 0.864±0.43 1.223±0.00 2.755±0.00 1.216±0.20 1.561±0.00 2.084±1.93 3.424±2.00 1.931±0.35 3.234±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00025V CIL_00025V_0001 CGP 7:156668946-156973182
CIL_0007PG CIL_0007PG_0001 UCNEbase 7:156746986-157209208
CIL_00025W CIL_00025W_0001 CGP 7:156949723-157010651

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0008150 ND biological_process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000001611 Nom1-001 protein_coding Mus_musculus 0 1404
ENSMUST00000048099 Tmem194-001 protein_coding Mus_musculus 0.0000002 64

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