C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00026X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000178814-ENSG00000178896 CGP 9606 8:144051266-144080647
GeneTranscriptPositionBiotype
ENSG00000178896 (EXOSC4)
exosome component 4 		ENST00000316052 (EXOSC4-001) 144078626-144080647 protein_coding
ENST00000525936 (EXOSC4-002) 144078648-144080516 protein_coding
ENST00000527954 (EXOSC4-003) 144079423-144080579 protein_coding
ENSG00000255224 (CTD-3065J16.9)
 ENST00000524499 (CTD-3065J16.9-001) 144078002-144079265 antisense
CIL_00026X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022562-ENSMUSG00000034259 CGP 10090 15:76296597-76330677
GeneTranscriptPositionBiotype
ENSMUSG00000022562 (Oplah)
5-oxoprolinase (ATP-hydrolysing) 		ENSMUST00000023222 (Oplah-201) 76296603-76307245 protein_coding
ENSMUST00000163127 (Oplah-005) 76300876-76302362 retained_intron
ENSMUST00000163977 (Oplah-004) 76302064-76303200 processed_transcript
ENSMUST00000164189 (Oplah-002) 76300954-76307389 protein_coding
ENSMUST00000165279 (Oplah-003) 76306487-76328015 protein_coding
ENSMUST00000169664 (Oplah-007) 76297343-76298040 retained_intron
ENSMUST00000170063 (Oplah-006) 76300587-76301115 retained_intron
ENSMUST00000170261 (Oplah-008) 76296603-76297492 retained_intron
ENSMUST00000171340 (Oplah-001) 76296597-76307101 protein_coding
ENSMUSG00000034259 (Exosc4)
exosome component 4 		ENSMUST00000059045 (Exosc4-001) 76327397-76330677 protein_coding
ENSMUST00000167515 (Exosc4-002) 76327591-76329095 processed_transcript
ENSMUSG00000071724 (Smpd5)
sphingomyelin phosphodiesterase 5 		ENSMUST00000096370 (Smpd5-003) 76295251-76296893 retained_intron
ENSMUST00000163991 (Smpd5-001) 76294434-76296896 protein_coding
ENSMUST00000167433 (Smpd5-004) 76295309-76295873 retained_intron
ENSMUST00000171192 (Smpd5-002) 76294968-76296252 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026X_0001ENSG00000178896ENST00000316052ENST00000525936ENST00000527954ENSG00000255224ENST00000524499CIL_00026X_0002ENSMUSG00000022562ENSMUST00000023222ENSMUST00000163127ENSMUST00000163977ENSMUST00000164189ENSMUST00000165279ENSMUST00000169664ENSMUST00000170063ENSMUST00000170261ENSMUST00000171340ENSMUSG00000034259ENSMUST00000059045ENSMUST00000167515ENSMUSG00000071724ENSMUST00000096370ENSMUST00000163991ENSMUST00000167433ENSMUST00000171192
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00026X_0001ENSG00000178896ENST00000316052ENST00000525936ENST00000527954ENSG00000255224ENST00000524499CIL_00026X_0002ENSMUSG00000022562ENSMUST00000023222ENSMUST00000163977ENSMUST00000164189ENSMUST00000171340ENSMUSG00000034259ENSMUST00000059045ENSMUSG00000071724ENSMUST00000096370ENSMUST00000163991ENSMUST00000167433
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000178896 ENST00000316052 12.453±0.00 19.703±0.00 1.418±0.00 6.865±4.11 10.366±8.29 6.425±5.49 3.686±3.15 12.038±8.96 8.444±7.14 4.163±3.73 4.143±1.75 14.681±6.07 18.898±10.54 27.254±12.13
ENST00000525936 N/A N/A N/A 3.627±0.00 N/A 3.057±2.01 2.204±0.00 5.327±2.61 2.757±2.34 1.791±1.31 4.151±0.00 2.950±0.73 3.313±0.00 17.345±2.20
ENST00000527954 N/A N/A 0.775±0.00 N/A 0.224±0.00 N/A N/A N/A N/A N/A N/A 0.682±0.00 N/A 1.818±0.00
ENSG00000255224 ENST00000524499 N/A N/A N/A 2.871±0.00 N/A N/A N/A N/A N/A N/A 0.793±0.00 2.205±0.00 0.586±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022562 ENSMUST00000023222 24.068±4.36 39.647±3.20 11.194±0.55 3.796±1.28 29.254±9.28 15.230±0.90 12.799±1.93 45.494±8.57 22.843±18.84 21.180±1.69 11.035±1.19 22.560±8.70 1.957±0.89 34.921±8.24
ENSMUST00000163127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 96.545±0.00
ENSMUST00000164189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.850±0.00 N/A N/A N/A
ENSMUST00000165279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171340 N/A 7.766±0.52 N/A N/A N/A N/A N/A N/A N/A N/A 2.477±0.00 2.824±0.02 1.287±0.00 N/A
ENSMUSG00000034259 ENSMUST00000059045 25.886±1.22 48.951±6.28 17.636±1.07 17.390±9.61 31.467±10.76 29.735±2.02 13.342±2.62 30.860±4.89 22.511±4.60 24.325±3.05 8.036±1.14 43.824±20.33 10.074±4.34 N/A
ENSMUST00000167515 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000071724 ENSMUST00000096370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 68.181±4.36
ENSMUST00000163991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 67.221±2.44
ENSMUST00000167433 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 173.676±0.00
ENSMUST00000171192 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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