C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00029M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205784-ENSG00000276043 CGP 9606 19:4890437-4962154
GeneTranscriptPositionBiotype
ENSG00000205784 (ARRDC5)
arrestin domain containing 5
ENST00000381781 (ARRDC5-001) 4890437-4902867 protein_coding
ENSG00000273632 (AC027319.3)
ENST00000622687 (AC027319.3-201) 4920332-4920442 miRNA
ENSG00000276043 (UHRF1)
ubiquitin-like with PHD and ring finger domains 1
ENST00000612630 (UHRF1-006) 4903080-4962154 protein_coding
ENST00000613817 (UHRF1-002) 4909498-4961171 protein_coding
ENST00000615884 (UHRF1-005) 4910146-4960961 protein_coding
ENST00000616255 (UHRF1-004) 4910375-4960952 protein_coding
ENST00000620565 (UHRF1-001) 4909430-4962150 protein_coding
ENST00000622802 (UHRF1-003) 4910367-4961132 protein_coding
ENST00000624301 (UHRF1-201) 4909498-4962151 protein_coding
CIL_00029M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000073380-ENSMUSG00000001228 CGP 10090 17:56294113-56323486
GeneTranscriptPositionBiotype
ENSMUSG00000001228 (Uhrf1)
ubiquitin-like, containing PHD and RING finger domains, 1
ENSMUST00000001258 (Uhrf1-001) 56303321-56323486 protein_coding
ENSMUST00000113035 (Uhrf1-003) 56304313-56323486 protein_coding
ENSMUST00000113038 (Uhrf1-002) 56303400-56323486 protein_coding
ENSMUST00000113039 (Uhrf1-004) 56304348-56323486 protein_coding
ENSMUST00000137876 (Uhrf1-006) 56312663-56313176 retained_intron
ENSMUST00000139654 (Uhrf1-007) 56318026-56322339 retained_intron
ENSMUST00000142387 (Uhrf1-005) 56304407-56310719 protein_coding
ENSMUSG00000073380 (Arrdc5)
arrestin domain containing 5
ENSMUST00000097303 (Arrdc5-201) 56294113-56300286 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029M_0001ENSG00000205784ENST00000381781ENSG00000273632ENST00000622687ENSG00000276043ENST00000612630ENST00000613817ENST00000615884ENST00000616255ENST00000620565ENST00000622802ENST00000624301CIL_00029M_0002ENSMUSG00000001228ENSMUST00000001258ENSMUST00000113035ENSMUST00000113038ENSMUST00000113039ENSMUST00000137876ENSMUST00000139654ENSMUST00000142387ENSMUSG00000073380ENSMUST00000097303
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029M_0001ENSG00000205784ENST00000381781ENSG00000273632ENST00000622687ENSG00000276043ENST00000612630ENST00000613817ENST00000615884ENST00000616255ENST00000622802ENST00000624301CIL_00029M_0002ENSMUSG00000001228ENSMUST00000001258ENSMUST00000113035ENSMUST00000113038ENSMUST00000113039ENSMUST00000139654ENSMUST00000142387ENSMUSG00000073380ENSMUST00000097303
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000205784 ENST00000381781 0.042±0.00 2.379±0.00 N/A 0.074±0.05 N/A N/A 0.010±0.00 N/A 0.069±0.03 0.126±0.00 N/A 0.142±0.06 0.030±0.00 8.135±0.34
ENSG00000273632 ENST00000622687 N/A 2.571±0.00 N/A 0.321±0.00 0.303±0.00 N/A N/A N/A N/A N/A N/A 19.194±0.00 N/A 0.530±0.00
ENSG00000276043 ENST00000612630 0.317±0.00 0.809±0.00 N/A 0.717±0.00 0.496±0.00 0.315±0.00 0.159±0.00 0.180±0.00 0.069±0.00 0.110±0.00 0.036±0.00 0.188±0.00 0.714±0.00 1.760±0.00
ENST00000613817 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00 N/A N/A N/A N/A
ENST00000615884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.038±0.00 N/A N/A N/A
ENST00000616255 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.167±0.00 N/A N/A N/A N/A
ENST00000620565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622802 N/A N/A N/A N/A N/A N/A 0.047±0.03 N/A 0.023±0.00 0.098±0.00 N/A N/A N/A 1.165±0.00
ENST00000624301 N/A N/A N/A 0.342±0.24 1.086±0.00 1.040±0.00 0.093±0.03 N/A 0.055±0.00 0.110±0.06 N/A 4.539±2.93 1.614±0.62 2.523±1.58
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000001228 ENSMUST00000001258 2.950±2.51 0.459±0.00 1.276±0.00 3.934±1.23 1.245±0.61 3.407±1.29 0.195±0.04 0.260±0.09 31.605±17.05 0.739±0.32 0.073±0.00 5.253±2.65 7.866±1.17 N/A
ENSMUST00000113035 0.170±0.00 N/A N/A N/A N/A N/A N/A 0.215±0.00 0.097±0.06 N/A N/A N/A N/A 4.772±1.35
ENSMUST00000113038 0.972±0.55 0.852±0.25 0.410±0.07 3.320±0.45 1.344±0.79 3.339±0.51 N/A 0.321±0.20 7.846±6.32 0.759±0.00 0.083±0.05 6.197±2.33 10.324±6.91 N/A
ENSMUST00000113039 1.969±1.18 0.678±0.00 0.973±0.26 5.478±3.83 0.962±0.17 1.504±0.13 0.260±0.00 0.385±0.14 20.748±14.10 0.544±0.11 0.208±0.16 6.416±2.20 11.507±10.47 14.108±5.96
ENSMUST00000137876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.095±0.01 N/A N/A N/A
ENSMUST00000142387 N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A N/A 23.931±0.00 42.820±39.29 53.415±0.00
ENSMUSG00000073380 ENSMUST00000097303 N/A 0.071±0.00 0.008±0.00 0.061±0.00 0.167±0.06 N/A 0.444±0.01 0.034±0.00 0.024±0.01 0.111±0.02 0.086±0.05 0.186±0.00 0.017±0.02 118.022±35.01

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