C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002BK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000049759-ENSG00000198796 CGP 9606 18:58044367-58628957
GeneTranscriptPositionBiotype
ENSG00000049759 (NEDD4L)
neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase 		ENST00000256830 (NEDD4L-037) 58044661-58396573 protein_coding
ENST00000356462 (NEDD4L-005) 58044367-58396574 protein_coding
ENST00000357895 (NEDD4L-003) 58149333-58396705 protein_coding
ENST00000382850 (NEDD4L-002) 58044548-58401539 protein_coding
ENST00000400345 (NEDD4L-001) 58044378-58396705 protein_coding
ENST00000431212 (NEDD4L-014) 58221535-58396578 protein_coding
ENST00000435432 (NEDD4L-017) 58149333-58396551 protein_coding
ENST00000456173 (NEDD4L-013) 58195390-58398157 protein_coding
ENST00000456986 (NEDD4L-201) 58047226-58401540 protein_coding
ENST00000585323 (NEDD4L-015) 58221631-58316001 processed_transcript
ENST00000585363 (NEDD4L-008) 58045934-58245508 processed_transcript
ENST00000585594 (NEDD4L-010) 58054709-58165839 processed_transcript
ENST00000585970 (NEDD4L-041) 58359871-58366231 processed_transcript
ENST00000586263 (NEDD4L-004) 58149337-58396573 protein_coding
ENST00000586268 (NEDD4L-024) 58221568-58329127 protein_coding
ENST00000587190 (NEDD4L-016) 58221571-58322486 protein_coding
ENST00000587246 (NEDD4L-032) 58366597-58373255 processed_transcript
ENST00000587547 (NEDD4L-011) 58090791-58165839 processed_transcript
ENST00000587634 (NEDD4L-023) 58247281-58323309 processed_transcript
ENST00000587881 (NEDD4L-030) 58323320-58396333 protein_coding
ENST00000588066 (NEDD4L-018) 58197769-58325082 processed_transcript
ENST00000588494 (NEDD4L-019) 58195653-58323289 protein_coding
ENST00000588516 (NEDD4L-009) 58046363-58245508 processed_transcript
ENST00000588712 (NEDD4L-034) 58387711-58396580 retained_intron
ENST00000589054 (NEDD4L-022) 58044384-58396704 protein_coding
ENST00000589167 (NEDD4L-027) 58330851-58336092 retained_intron
ENST00000590020 (NEDD4L-026) 58323305-58334020 retained_intron
ENST00000590248 (NEDD4L-036) 58373170-58389519 retained_intron
ENST00000590506 (NEDD4L-035) 58390064-58398157 retained_intron
ENST00000590638 (NEDD4L-028) 58340959-58366073 retained_intron
ENST00000590694 (NEDD4L-007) 58045525-58165861 processed_transcript
ENST00000591579 (NEDD4L-006) 58045697-58165839 processed_transcript
ENST00000591989 (NEDD4L-039) 58045689-58245489 processed_transcript
ENST00000592097 (NEDD4L-033) 58373111-58391509 retained_intron
ENST00000592601 (NEDD4L-025) 58314555-58329127 processed_transcript
ENST00000592846 (NEDD4L-020) 58045707-58322471 protein_coding
ENST00000617539 (NEDD4L-042) 58044387-58045477 protein_coding
ENSG00000198796 (ALPK2)
alpha-kinase 2 		ENST00000361673 (ALPK2-001) 58481247-58628957 protein_coding
ENST00000587399 (ALPK2-006) 58544228-58579212 processed_transcript
ENST00000587842 (ALPK2-005) 58538140-58579024 processed_transcript
ENST00000589204 (ALPK2-003) 58528752-58537119 retained_intron
ENST00000590642 (ALPK2-004) 58580260-58580973 processed_transcript
ENST00000590662 (ALPK2-002) 58577944-58580169 retained_intron
ENSG00000267257 (RP11-1151B14.4)
 ENST00000591360 (RP11-1151B14.4-001) 58535415-58538552 antisense
ENSG00000267391 (MIR3591)
microRNA 3591 		ENST00000590797 (MIR3591-001) 58446275-58453766 lincRNA
ENSG00000267504 (RP11-845C23.2)
 ENST00000587933 (RP11-845C23.2-001) 58371566-58372666 sense_intronic
ENSG00000267579 (RP11-126O1.2)
 ENST00000589794 (RP11-126O1.2-001) 58557070-58566677 antisense
ENSG00000267675 (RP11-1151B14.2)
 ENST00000585470 (RP11-1151B14.2-001) 58416765-58417628 lincRNA
ENSG00000274354 (RP11-1151B14.5)
 ENST00000610389 (RP11-1151B14.5-001) 58511598-58512310 sense_intronic
ENSG00000276403 (RP11-1151B14.1)
 ENST00000622635 (RP11-1151B14.1-001) 58476191-58477484 lincRNA

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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CIL_0002BK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024589-ENSMUSG00000032845 CGP 10090 18:64887756-65393888
GeneTranscriptPositionBiotype
ENSMUSG00000024589 (Nedd4l)
neural precursor cell expressed, developmentally down-regulated gene 4-like 		ENSMUST00000080418 (Nedd4l-201) 65023527-65217826 protein_coding
ENSMUST00000163516 (Nedd4l-202) 64887756-65217826 protein_coding
ENSMUSG00000032845 (Alpk2)
alpha-kinase 2 		ENSMUST00000035548 (Alpk2-002) 65265529-65393887 protein_coding
ENSMUST00000141250 (Alpk2-001) 65274743-65349534 protein_coding
ENSMUST00000182629 (Alpk2-003) 65363049-65393888 processed_transcript

Mus musculus Ensembl (GRCm38)

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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002BK_0001ENSG00000049759ENST00000256830ENST00000356462ENST00000357895ENST00000382850ENST00000400345ENST00000431212ENST00000456173ENST00000456986ENST00000586263ENST00000587881ENST00000590506ENST00000590638ENSG00000198796ENST00000361673ENST00000587399ENST00000589204ENST00000590662ENSG00000267257ENST00000591360ENSG00000267391ENST00000590797ENSG00000267504ENST00000587933ENSG00000267579ENST00000589794ENSG00000267675ENST00000585470ENSG00000274354ENST00000610389ENSG00000276403ENST00000622635CIL_0002BK_0002ENSMUSG00000024589ENSMUST00000080418ENSMUST00000163516ENSMUSG00000032845ENSMUST00000035548ENSMUST00000141250ENSMUST00000182629
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000049759 ENST00000256830 N/A N/A N/A N/A N/A N/A 0.933±0.00 N/A N/A N/A 1.806±0.00 N/A N/A N/A
ENST00000356462 2.321±0.00 0.725±0.00 N/A N/A N/A N/A N/A N/A 0.752±0.00 6.718±0.00 1.702±0.00 N/A N/A 3.090±0.00
ENST00000357895 N/A N/A N/A N/A 1.591±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000382850 N/A N/A 3.293±0.00 5.339±1.67 0.614±0.00 N/A N/A 0.862±0.00 0.563±0.09 2.582±0.00 2.288±0.00 1.074±0.37 0.921±0.00 1.197±0.00
ENST00000400345 1.382±0.00 N/A N/A N/A 1.295±0.00 N/A N/A N/A N/A N/A N/A 1.196±0.00 N/A N/A
ENST00000431212 N/A N/A N/A N/A N/A 3.945±0.00 N/A N/A N/A 8.108±0.13 N/A 2.005±0.13 3.600±0.63 N/A
ENST00000435432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456173 N/A 0.305±0.00 4.827±0.00 4.828±0.00 N/A 4.220±0.00 N/A N/A 0.912±0.41 N/A N/A 1.849±0.00 N/A N/A
ENST00000456986 N/A N/A N/A N/A 0.697±0.00 2.414±0.00 N/A N/A 0.631±0.00 N/A N/A N/A N/A N/A
ENST00000585323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586263 1.222±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587547 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587881 N/A N/A N/A N/A N/A N/A 4.767±0.00 N/A N/A N/A 3.441±0.00 10.263±0.00 5.169±0.00 3.603±0.58
ENST00000588066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590248 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590506 N/A N/A N/A N/A N/A N/A N/A 2.941±0.00 N/A N/A N/A N/A N/A N/A
ENST00000590638 N/A N/A 28.274±0.00 19.718±0.00 N/A N/A N/A N/A 6.412±0.00 32.522±0.00 N/A 9.207±0.00 N/A N/A
ENST00000590694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617539 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198796 ENST00000361673 N/A 0.316±0.00 0.330±0.00 0.010±0.00 0.354±0.00 0.049±0.04 8.732±5.09 0.266±0.00 N/A 0.112±0.08 6.264±4.37 0.053±0.03 0.258±0.00 0.220±0.05
ENST00000587399 N/A N/A N/A N/A N/A 0.484±0.00 N/A N/A 0.278±0.00 N/A N/A 0.761±0.00 N/A N/A
ENST00000587842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589204 0.100±0.00 N/A 0.927±0.00 0.031±0.03 N/A N/A N/A 0.677±0.00 0.004±0.00 N/A N/A 0.084±0.00 0.185±0.02 N/A
ENST00000590642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590662 N/A N/A 1.081±0.00 N/A N/A 0.041±0.00 N/A 0.784±0.00 N/A N/A N/A 0.121±0.00 N/A N/A
ENSG00000267257 ENST00000591360 0.132±0.00 0.249±0.00 4.875±0.00 N/A 0.513±0.27 0.074±0.06 13.771±2.57 1.254±0.12 0.268±0.00 0.253±0.18 9.450±0.43 0.162±0.10 0.337±0.26 0.913±0.35
ENSG00000267391 ENST00000590797 0.033±0.00 0.090±0.00 N/A 0.030±0.00 0.048±0.01 0.033±0.00 0.058±0.01 3.716±3.70 0.975±0.96 0.049±0.02 0.014±0.01 0.016±0.01 0.007±0.00 0.079±0.02
ENSG00000267504 ENST00000587933 0.156±0.00 0.647±0.00 1.073±0.00 0.199±0.01 0.223±0.05 0.161±0.06 0.054±0.02 0.385±0.00 0.051±0.02 0.826±0.61 0.123±0.00 0.240±0.11 N/A 0.103±0.05
ENSG00000267579 ENST00000589794 N/A N/A N/A N/A N/A N/A 0.052±0.00 N/A N/A N/A N/A N/A N/A 15.311±8.37
ENSG00000267675 ENST00000585470 0.066±0.00 N/A N/A N/A N/A N/A N/A N/A 3.556±0.00 N/A N/A N/A N/A N/A
ENSG00000274354 ENST00000610389 N/A 0.062±0.00 N/A N/A N/A N/A 0.093±0.07 0.020±0.00 N/A N/A N/A 0.043±0.02 N/A 0.128±0.00
ENSG00000276403 ENST00000622635 N/A N/A N/A N/A N/A N/A 0.037±0.00 N/A N/A N/A N/A N/A N/A 0.061±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024589 ENSMUST00000080418 0.425±0.00 0.319±0.00 1.414±0.21 N/A 0.525±0.15 1.060±0.00 0.394±0.00 0.941±0.06 0.896±0.76 1.066±0.00 N/A 0.651±0.14 1.885±0.87 0.065±0.00
ENSMUST00000163516 2.563±1.19 1.359±0.40 2.353±0.65 6.559±0.57 1.833±0.59 5.369±0.58 0.663±0.06 4.836±0.57 0.412±0.17 3.860±1.13 0.576±0.01 1.803±0.31 1.645±0.93 0.207±0.05
ENSMUSG00000032845 ENSMUST00000035548 0.090±0.07 0.065±0.03 0.039±0.00 0.022±0.02 0.535±0.44 0.032±0.01 11.247±0.72 0.105±0.01 0.012±0.00 0.190±0.08 6.249±0.86 0.075±0.02 0.019±0.00 0.125±0.07
ENSMUST00000141250 0.015±0.00 N/A 0.021±0.00 0.076±0.00 0.233±0.17 0.032±0.01 N/A N/A 0.014±0.01 N/A 1.606±0.16 0.062±0.04 0.046±0.02 0.041±0.01
ENSMUST00000182629 0.054±0.00 0.294±0.09 0.831±0.21 0.857±0.56 0.452±0.00 0.238±0.02 N/A 0.246±0.12 0.763±0.81 0.276±0.00 N/A 1.742±2.39 2.197±1.54 0.489±0.33

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