C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: AF4/FMR2 family, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000153821 Aff4-008 ENSMUSG00000049470 10090 + 11:53368073-53372520 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000153821
Transcript ID Testis
ENSMUST00000153821 14.173±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BQ CIL_0002BQ_0002 CGP 11:53324679-53421830

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0007286 IMP spermatid development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000042840 aff4-201 protein_coding Danio_rerio 4e-39 165
ENSDART00000151748 aff4-001 protein_coding Danio_rerio 4e-39 165
ENSDART00000126998 aff4-202 protein_coding Danio_rerio 1e-38 163
ENSDART00000151350 aff4-003 processed_transcript Danio_rerio 2e-27 126
ENST00000265343 AFF4-001 protein_coding Homo_sapiens 0 544
ENST00000378595 AFF4-004 protein_coding Homo_sapiens 0 544
ENST00000421773 AFF4-009 protein_coding Homo_sapiens 0 682
ENST00000465484 AFF4-003 retained_intron Homo_sapiens 0 544
ENST00000491831 AFF4-002 processed_transcript Homo_sapiens 0 544

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